DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)gl and Stxbp5l

DIOPT Version :9

Sequence 1:NP_001245801.1 Gene:l(2)gl / 33156 FlyBaseID:FBgn0002121 Length:1161 Species:Drosophila melanogaster
Sequence 2:NP_001258179.1 Gene:Stxbp5l / 288080 RGDID:1311561 Length:1185 Species:Rattus norvegicus


Alignment Length:1290 Identity:306/1290 - (23%)
Similarity:484/1290 - (37%) Gaps:392/1290 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RHRLQKDL----FAYRKTAQHGFPHKPSALAYDPVLKLMAIGTQTGALKVFGQPGVELYGQHTLL 76
            |..:|:.|    |...||.:||||::|:|||:|||.|::||||:|||:::.|:|||:.|.||   
  Rat    46 REGIQESLISECFQICKTVRHGFPYQPTALAFDPVQKILAIGTRTGAIRILGRPGVDCYCQH--- 107

  Fly    77 NNSASELNVQLLEWVYGTGRILSLTAANQLILW---EPVGATLLPIK---------TLPFDGKLK 129
            .:.|:.|.:|.|   ...|.::|.::.:.|.||   :...|.|..:|         .|||..|  
  Rat   108 ESGAAVLQLQFL---INEGALVSASSDDTLHLWNLRQKRPAILHSLKFNRERITYCHLPFQSK-- 167

  Fly   130 KVSSLCCSLSKDLLWIGTEGGNIYQLDLHTFTIKEPVIYHDVVLEQVPPAYKLNPGAIESIRQLP 194
                        .|::|||.||.:.:::.:|.:...||..:..:|.   :.|.:||.:..:...|
  Rat   168 ------------WLYVGTERGNTHIVNIESFILSGYVIMWNKAIEL---STKTHPGPVVHLSDSP 217

  Fly   195 NSPSKLLVAYNRGLCVLWDFESASVQRAYIAPGHGQSV-GLTVNFEGSEFTWYHADGSYATWSID 258
            ....|||:.|..|..|.||.:|   :||.:...:.::: .:..:.||.:|...|:|||...|::.
  Rat   218 RDEGKLLIGYENGTVVFWDLKS---KRAELRVYYDEAIHSIDWHHEGKQFMCSHSDGSLTLWNLK 279

  Fly   259 NPEPPSNVNYVPYG--------PDPCKSINRL-YKGKRRSNDVIVFSGGMPRSAYGDHNC--VSV 312
            :|..|.... ||:|        .:.||.|.:: ||..|.|...|:||||:   :| |..|  .|:
  Rat   280 SPSRPFQTT-VPHGKSQREGRKSESCKPILKVEYKTCRNSEPFIIFSGGL---SY-DKACRRPSL 339

  Fly   313 HASDGHKV-CLDFTSKVIDFFVTFE----NNRDVAEVLVVLLEEELCAYDLTDPNICAIKAPYLH 372
            ....|..: .|:....:::|....|    |.......:.||||::|...|||..|....:.||..
  Rat   340 TIMHGKAITVLEMDHPIVEFLTLCETPYPNEFQEPYAVAVLLEKDLIVVDLTQTNFPIFENPYPM 404

  Fly   373 SVHASAVTCN-YLAS---EVVQSVYESILRAGDEQDIDYSNISWPITGGTLPDNLEESVEEDATK 433
            .:|.|.|||. |.|.   :::..:|...::   .:...|||..||::||..  ||      .|..
  Rat   405 DIHESPVTCTAYFADCPPDLILVLYSIGVK---HKKQGYSNKEWPVSGGAW--NL------GAQT 458

  Fly   434 LYEILLTGHEDGSVKFWDCTGVLLKPIYNFKTSSIFGSESDFRDDAAAD--MSAEQVDEGEPPFR 496
            ..||::|||.||::||||.:.:.|:.:|..|||.:|..:.      ..|  .:.|.|:|      
  Rat   459 YPEIIITGHADGTIKFWDASAMTLQMLYKLKTSKVFEKQK------VGDGKQTCEIVEE------ 511

  Fly   497 KSGLFDPYSDDPRLAVKKIAFCPKTGQLIVGGTAGQIVIADFID---LPEKVSLKY--------- 549
                 ||:      ||:.|.:||::....|.|.:..::|..|..   ..|.|||:.         
  Rat   512 -----DPF------AVQMIYWCPESRIFCVSGVSAYVIIYKFSRHEITAEIVSLEVRLQCDVEDI 565

  Fly   550 -------------ISMNLVSDRDGFVWKGHDQLNVRSNLLDGE-----AIPTTE---------RG 587
                         :|..|.|.|         .|:..:|.:..|     :||...         .|
  Rat   566 ITPEPETSPPFPDLSSQLPSSR---------SLSGSTNTVSSEGVTKDSIPCLSVKTRPVRMPPG 621

  Fly   588 VNISGVLQVL-----PPASITCMALEASWGLVSGGTAHGLVLFDF-------------------- 627
            .....|:|::     ||..||.:|:.:::|:|:.|...|||:.||                    
  Rat   622 YQADLVIQLVWVDGEPPQQITSLAVSSAYGIVAFGNCTGLVVVDFIQKTVLLSMGTIDLYRSSDL 686

  Fly   628 ------------------------KNFVP-----------------------------------V 633
                                    .||.|                                   |
  Rat   687 YQRQPRSPRKNRQFIADNFCMRGLSNFYPDLTKRIRTSYQSLTELNDSPVPLELERCKSPTSDHV 751

  Fly   634 FHRCTLNPNDLTGAGEQLSRRKSFKKSL----RESFRKLRKG-----------RSTRTNQSNQVP 683
            ...||...:....:|::||.....|.:.    |..|||.:..           ..||.|..|:  
  Rat   752 NGHCTSPTSQSCSSGKRLSSADVSKVNRWGPGRPPFRKAQSAACMEISLPVTTEETRENSYNR-- 814

  Fly   684 TTLEARPVERQIEARCADDGLGSMVRCLLFAKTYV-TNVNITSPTLWSATNASTVSVFLLHLPPA 747
                    .|.......|......:..|.|.:::. .|.:..||.|:..|:...|.:..|:||.:
  Rat   815 --------SRSSSISSIDKDSKEAITALYFMESFARKNDSTVSPCLFVGTSLGMVILISLNLPSS 871

  Fly   748 Q-----TAATAVPSASGNAPPHMPRRISAQLAKEIQLKHRAPVVGISIFDQAGSPV--------D 799
            .     .....:||.:                   .|..:..|:..|..|:.|:.:        |
  Rat   872 DEQRFTEPVVVLPSGT-------------------FLSLKGAVLTFSCMDRTGNLMQPPYEVWRD 917

  Fly   800 QLNAGENGSPPHR------------------VLIASEEQFKVFSLPQLKPINKYKLTANEGARIR 846
            ..|..||.....|                  .:|.||:|.||||||.                  
  Rat   918 PNNTDENEKTWKRKLVMNYSSSSQEMGDHQYTIICSEKQAKVFSLPS------------------ 964

  Fly   847 RIHFGSFSCRISPETLQSMHGCSPTKSTRSHGDGEADPNISGSLAVSRGDVY---NETALICLTN 908
                         :|...:|                  ||:.:..:.:.||.   |...|.|...
  Rat   965 -------------QTCLYVH------------------NITETSFILQADVVVMCNSACLACFCA 998

  Fly   909 MGDIMVLSVPELKRQLNAAAVRREDINGVSSLCFTNSGEALYMMSSSELQRIALATSRVVQPTGV 973
            .|.||::|:|.|:..|:...:...|:....:.||||.|:|||::|.:|:||:..:.         
  Rat   999 NGHIMIMSLPSLRPMLDVNYLPLTDMRIARTFCFTNEGQALYLVSPTEIQRLTYSQ--------- 1054

  Fly   974 VPVEPLENEESVLEENDAENNKETYACDEVVNTYEIKNPSGISICTRPAEENVGRNSVQQVNGVN 1038
               |..:|.:.:|  .|.....||   .|..|...:|...|.|..|...||..|..|..:.:...
  Rat  1055 ---EMCDNIQDML--GDLFTPIET---PEAQNRGFLKGLFGGSGQTFDREELFGEASAGKASRSL 1111

  Fly  1039 ISNSPNQAN-ETISSSIGDITVDSVRDHLNMTTTTLCSINTEETIGRLSVLSTQT 1092
            ..:.|...: |.:..:.|.:          |...|...|..:|...||..|..:|
  Rat  1112 AQHIPGPGSIEGMKGAAGGV----------MGELTRARIALDERGQRLGELEEKT 1156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)glNP_001245801.1 WD40 repeat 39..78 CDD:293791 21/38 (55%)
WD40 repeat 84..126 CDD:293791 13/53 (25%)
WD40 repeat 131..174 CDD:293791 9/42 (21%)
WD40 repeat 188..224 CDD:293791 12/35 (34%)
LLGL 268..>338 CDD:285555 23/85 (27%)
Stxbp5lNP_001258179.1 WD40 73..>280 CDD:295369 70/232 (30%)
WD40 repeat 73..106 CDD:293791 19/32 (59%)
WD40 108..503 CDD:225201 122/439 (28%)
WD40 repeat 114..152 CDD:293791 10/40 (25%)
WD40 repeat 210..247 CDD:293791 12/39 (31%)
WD40 repeat 252..288 CDD:293791 10/35 (29%)
LLGL 288..395 CDD:285555 32/111 (29%)
R-SNARE_STXBP5 1118..1178 CDD:277246 10/49 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 52 1.000 Domainoid score I11190
eggNOG 1 0.900 - - E1_KOG1983
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000702
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X453
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.810

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