DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)gl and llgl1

DIOPT Version :9

Sequence 1:NP_001245801.1 Gene:l(2)gl / 33156 FlyBaseID:FBgn0002121 Length:1161 Species:Drosophila melanogaster
Sequence 2:XP_002935892.2 Gene:llgl1 / 100486472 XenbaseID:XB-GENE-868457 Length:1052 Species:Xenopus tropicalis


Alignment Length:1143 Identity:403/1143 - (35%)
Similarity:619/1143 - (54%) Gaps:187/1143 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLKF-IRGKGQQPSADRHRLQKDLFAYRKTAQHGFPHKPSALAYDPVLKLMAIGTQTGALKVFGQ 64
            |:|| .|.:|..|  .|.:::::|||:.||.:||||::||:||:||:|::||||.::||:|::|.
 Frog     1 MMKFRFRRQGHDP--QREKIKQELFAFNKTVEHGFPNQPSSLAFDPLLRIMAIGAKSGAVKIYGA 63

  Fly    65 PGVELYGQHTLLNNSASELNVQLLEWVYGTGRILSLTAANQLILW-----------EPVGATLLP 118
            ||||..|.|   .::|:   |..:.::.|.||:|||...|.:.||           |...:.|||
 Frog    64 PGVEFTGLH---KDTAT---VTQMHFLPGQGRLLSLLDDNTMHLWELQQKDGSSHLEETRSFLLP 122

  Fly   119 IKTLPFD-----GKLKKVSSLCCSLSKDLLWIGTEGGNIYQLDLHTF-TIKEPVIYHDVVLEQVP 177
            .|. .||     ....:|:.:..:.|.::..:|||||.:|.:.:.:. .::|..:..|.:::.:|
 Frog   123 GKP-GFDCANSPPSFTRVTVILITASCEVAGLGTEGGGVYFIQIPSLKLLEEKTLLQDEIVKSLP 186

  Fly   178 PAYKLNP--GAIESIRQLPNSPSKLLVAYNRGLCVLWDFESASVQRAYIAPGHGQSVGLTVNFEG 240
            ..|:...  |.:||:::.|.....:|:.|:|||.||||.|...|:..::  |:.|...:....:|
 Frog   187 EEYRCGKTLGPVESLQEHPCQRGTILIGYSRGLVVLWDQEGRKVEHLFL--GNQQLESVFWGRKG 249

  Fly   241 SEFTWYHADGSYATWSIDNPEPPSN---VNYVPYGPDPCKSINRL-YKGKRRSNDVIVFSGGMPR 301
            :.|...|:||.|..|...:....::   .:.:||||.|||:||:: ::.....|..|:|||||||
 Frog   250 TSFISSHSDGGYMVWEAASDSSTTSQPVTSKIPYGPFPCKAINKIQWRSSSSGNPYIIFSGGMPR 314

  Fly   302 SAYGDHNCVSVHASDGHKVCLDFTSKVIDFF----VTFENNRDVAEVLVVLLEEELCAYDLTDPN 362
            ::|||.:||:: ....:.|.|||||:|:|||    :..|::.|....||||:||||...||..|.
 Frog   315 ASYGDRHCVTI-LQGQNLVTLDFTSRVVDFFTVCPLKSEDDSDNPTALVVLVEEELVVIDLQTPG 378

  Fly   363 ICAIKAPYLHSVHASAVTCNYLASEVVQSVYESILRAGDEQDIDYSNISWPITGGTLPDNLEESV 427
            ...:..|||..:|:||:||.|..|.|...::|.|:.||::|:..:|:::|||.||.   ||   .
 Frog   379 WPTVPTPYLAPLHSSAITCAYHISNVTTKLWERIISAGEQQNPQFSSVNWPIDGGR---NL---A 437

  Fly   428 EEDATKLYEILLTGHEDGSVKFWDCTGVLLKPIYNFKTSSIFGSESDFRDDAAADMSAEQVDEGE 492
            ||.|.:  .:||||||||:|:|||.:||.|:|:|...|:.||.::.|..:.     ..:..||..
 Frog   438 EEPAQR--GLLLTGHEDGTVRFWDASGVALRPLYKLSTAGIFQTDCDHNES-----FNQSNDEEW 495

  Fly   493 PPFRKSGLFDPYSDDPRLAVKKIAFCPKTGQLIVGGTAGQIVIADFIDLPEKV--SLKYISMNLV 555
            |||||.|.||||||||||.::|||.|..:|:::|.|||||:::.|..|  |||  ::...:::|:
 Frog   496 PPFRKVGCFDPYSDDPRLGIQKIALCKYSGKMLVAGTAGQVLVMDLND--EKVEHTINVATVDLL 558

  Fly   556 SDRDGFVWKGHDQLNVRSNLLDGEAIPTTERGVNISGVLQVLPPASITCMALEASWGLVSGGTAH 620
            .:|:||.|||||:|..|:..|      ..:.|.....::|.:|||::|.:||.:.|.||:.||:|
 Frog   559 QEREGFTWKGHDRLTPRNGSL------FFQPGFQTITLVQCMPPAAVTAVALHSEWNLVAFGTSH 617

  Fly   621 GLVLFDFKNFVPVFHRCTLNPNDLTGAGEQLSRRKSFKKSLRESFRKLRKGR------------S 673
            |..|||:....||..||||:|||.......|||.||.|||||:|||::||.|            .
 Frog   618 GFGLFDYHRRSPVLARCTLHPNDSLAMEGPLSRVKSLKKSLRQSFRRIRKSRVSGKKRPNTGSPP 682

  Fly   674 TRTNQSNQV------PTTLEARPVERQIEARCADDGLGSMVRCLLFAKTYVTNVNITSPTLWSAT 732
            :|..::|..      |..|:..||:|:||.|.|||.|..:||||.||.|::.:.....||:|:.|
 Frog   683 SRLQEANAQLAEQAGPHDLDIAPVQRRIEPRSADDSLSGVVRCLYFADTFLRDAIHHGPTMWAGT 747

  Fly   733 NASTVSVFLLHLPPAQTAATAVPSASGNAPPHMPRRISAQLAKEIQLKHRAPVVGISIFDQAGSP 797
            |:.:|..:.|.:|..:..:              .|...|.|.|||||.||||||.|::.|..|:|
 Frog   748 NSGSVFAYALEVPSREKLS--------------DRSAEAVLGKEIQLMHRAPVVSIAVLDGRGNP 798

  Fly   798 VDQ-------LNAGENGSPPHRVLIASEEQFKVFSLPQLKPINKYKLTANEGARIRRIHFGSFSC 855
            :.:       |....:....|.|||:||||||||:||::....|:||||:||.|:|::...:|:.
 Frog   799 LPEPFEVSQDLAKAPDMQGTHSVLISSEEQFKVFTLPKVSAKTKFKLTAHEGCRVRKVALATFTS 863

  Fly   856 RISPETLQSMHGCSPTKSTRSHGDGEADPNISGSLAVSRGDVYNETALICLTNMGDIMVLSVPEL 920
            ..|                                     |.|:|..|.||||:|||.|.:||.|
 Frog   864 ATS-------------------------------------DDYSENCLACLTNLGDIHVFTVPGL 891

  Fly   921 KRQLNAAAVRREDINGVSSLCFTNSGEALYMMSSSELQRIALATSRVVQPTGVV----PVEPLE- 980
            :.|:....:|:|||:|::|..||..|:..|::|.||.:|.:|:...:.:|..:|    |.:||. 
 Frog   892 RPQVRYDCIRKEDISGIASCVFTKYGQGFYLISPSEFERFSLSAKNITEPVCLVEFDRPHDPLHF 956

  Fly   981 -------------NEESVLEENDA-ENNKETYACDEVVNTYEIKNPSGISICTRPAEENVGRNSV 1031
                         |...:|.:::| :...|...|:.:...    :||.:                
 Frog   957 SNKMTPSPKGNQANGTHILRDSEASQQATEGNGCERMAEF----SPSPL---------------- 1001

  Fly  1032 QQVNGVNISNSPNQANETISSSIGDITVDSVRDHLNMT 1069
                     :||..:.:|...:.|||||:.|||.|..|
 Frog  1002 ---------DSPMNSMDTTLDTTGDITVEDVRDILGST 1030

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)glNP_001245801.1 WD40 repeat 39..78 CDD:293791 20/38 (53%)
WD40 repeat 84..126 CDD:293791 17/57 (30%)
WD40 repeat 131..174 CDD:293791 10/43 (23%)
WD40 repeat 188..224 CDD:293791 14/35 (40%)
LLGL 268..>338 CDD:285555 34/74 (46%)
llgl1XP_002935892.2 WD40 repeat 37..69 CDD:293791 19/31 (61%)
WD40 repeat 78..116 CDD:293791 11/37 (30%)
LLGL 279..379 CDD:400597 46/100 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 375 1.000 Domainoid score I863
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H31220
Inparanoid 1 1.050 656 1.000 Inparanoid score I771
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D113391at33208
OrthoFinder 1 1.000 - - FOG0000702
OrthoInspector 1 1.000 - - otm47732
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X453
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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