DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cda4 and chia.1

DIOPT Version :9

Sequence 1:NP_728468.1 Gene:Cda4 / 33144 FlyBaseID:FBgn0052499 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_998215.1 Gene:chia.1 / 406323 ZFINID:ZDB-GENE-040426-1994 Length:455 Species:Danio rerio


Alignment Length:39 Identity:14/39 - (35%)
Similarity:19/39 - (48%) Gaps:0/39 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 NGNYADPATCRRFYQCVDGYPYLNRCPSGLFFDDVQKFC 72
            :|.|..|....:::.|..|..||.:|..||.|.|..|.|
Zfish   414 DGLYPHPTDASKYFHCFRGNTYLQQCQPGLVFVDACKCC 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cda4NP_728468.1 CBM_14 33..80 CDD:279884 14/39 (36%)
CE4_CDA_like_1 130..396 CDD:200596
chia.1NP_998215.1 Glyco_18 23..364 CDD:214753
GH18_chitolectin_chitotriosidase 24..386 CDD:119351
ChtBD2 407..455 CDD:214696 14/39 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592045
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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