DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cda4 and Cht9

DIOPT Version :10

Sequence 1:NP_728468.1 Gene:Cda4 / 33144 FlyBaseID:FBgn0052499 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_611543.3 Gene:Cht9 / 37392 FlyBaseID:FBgn0034582 Length:368 Species:Drosophila melanogaster


Alignment Length:203 Identity:36/203 - (17%)
Similarity:70/203 - (34%) Gaps:36/203 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 YGHEIGTESISQQQGLQDKGYE-EWVGEMIGMREILRHFANVSVNDVVGMRAPFLKPGRNTQYKV 250
            ||:|:|. ::...:.|....|| ..:.:.:....::.:...::.:...|..||        |:.|
  Fly   172 YGYELGI-AVGAGESLASASYEIANIAQQVDFINVMTYDFAMASDGQTGFNAP--------QWAV 227

  Fly   251 LEDFGYIYDSSITVPPVPVPVWPYTLDYKISHECKSGTCPSRTFPGVWEVPLNTHYVEG-YEG-- 312
            .....:..........:.:.|..|...:::|..       |:.:||   .|.......| |.|  
  Fly   228 ENAINFWLSQGAPANKLVLGVGTYGRSFQLSDS-------SQNWPG---APCRGEGSAGSYTGST 282

  Fly   313 GHCPYLDQC-----VLHNLDEEEVFQWLQEDFSRYYEQNKAPYMMPFHTNWFQTKPLENGLHKFL 372
            |:..|.:.|     .:.:.|....:.:..:.:..:.......|.|.|        .|..||...:
  Fly   283 GYLGYNEICQNNWHTVFDYDNAAPYAYSGDQWVSFDNVLSVQYKMDF--------ALSKGLAGAM 339

  Fly   373 DWALELPD 380
            .|:||..|
  Fly   340 IWSLETDD 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cda4NP_728468.1 CBM_14 33..80 CDD:426342
CE4_CDA_like_1 130..396 CDD:200596 36/203 (18%)
Cht9NP_611543.3 GH18_chitolectin_chitotriosidase 23..366 CDD:119351 36/203 (18%)
Blue background indicates that the domain is not in the aligned region.

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