DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cda4 and Idgf6

DIOPT Version :9

Sequence 1:NP_728468.1 Gene:Cda4 / 33144 FlyBaseID:FBgn0052499 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001286499.1 Gene:Idgf6 / 36868 FlyBaseID:FBgn0013763 Length:452 Species:Drosophila melanogaster


Alignment Length:75 Identity:16/75 - (21%)
Similarity:27/75 - (36%) Gaps:24/75 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   398 ELRDVSQIESW---KCDKS---VSVAPKPCNIWQTCALPFKI----------PEQNLTDTRYMET 446
            |....:|::.|   .|..|   |.||        |...|:|:          |.:::.|...:..
  Fly   282 EFNVAAQVKYWLRNNCPASKINVGVA--------TYGRPWKLTDDSGDTGVPPVKDVKDEAPVGG 338

  Fly   447 CRECPNVYPW 456
            ..:.|.:|.|
  Fly   339 NTQVPGIYSW 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cda4NP_728468.1 CBM_14 33..80 CDD:279884
CE4_CDA_like_1 130..396 CDD:200596
Idgf6NP_001286499.1 GH18_IDGF 30..450 CDD:119352 16/75 (21%)
Glyco_18 31..429 CDD:214753 16/75 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463790
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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