DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cda4 and Chial1

DIOPT Version :10

Sequence 1:NP_728468.1 Gene:Cda4 / 33144 FlyBaseID:FBgn0052499 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001426353.1 Gene:Chial1 / 295352 RGDID:1309110 Length:440 Species:Rattus norvegicus


Alignment Length:296 Identity:53/296 - (17%)
Similarity:85/296 - (28%) Gaps:127/296 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 IIMLTFDGAVNL----NNYQHYQKIFDG-KRKNPNGCLIRGTFFMSHEYSNYQQIQHL--GYYGH 189
            ::.:..|.|..|    ||:..||....| |..:.:.||                ..||  .:.|.
  Rat    30 LLNVQLDSAYQLMCYFNNWPQYQPDVRGMKLDDIDPCL----------------CTHLIYSFAGI 78

  Fly   190 EIGTESISQQQGLQDKGYEEWVGEMIGMREILRHFANVSVNDVVGMRAPFLKPGRNTQYKVLEDF 254
            .....::::::.|.|  |:|:                   ||        ||. ||.:.|.|...
  Rat    79 WENNNTMTKRKDLDD--YKEF-------------------ND--------LKK-RNNKLKTLLSI 113

  Fly   255 G-YIYDSSITVPPVPVP------------------------VWPY-------------------- 274
            | :.:::.:.:..|..|                        .|.|                    
  Rat   114 GCWNFEAGLFITMVSTPESRHTFITSVRKFLRKYGFDGLNLAWQYPGCYGSPPKDKHLFTILTQE 178

  Fly   275 ---TLDYKISHECKSGTCPSRTFPGVWEVPLNTHYVEGYEGGHCPYLDQCVLHNLDEEEVFQW-L 335
               ..:.::|...||....:....||.. |:...|       |.|.|.|    :||..:|..: |
  Rat   179 IRKAFEKEVSKNKKSRLIITAALAGVIS-PIQFGY-------HVPQLSQ----SLDYIQVMTYDL 231

  Fly   336 QEDFSRYYEQNKAPYMMPFHT-------------NW 358
            ...:..|..:|...|..|..|             ||
  Rat   232 HGSWDGYTGENSPLYKSPAETGVKAFYNIKYTMHNW 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cda4NP_728468.1 CBM_14 33..80 CDD:426342
CE4_CDA_like_1 130..396 CDD:200596 53/296 (18%)
Chial1NP_001426353.1 None
Blue background indicates that the domain is not in the aligned region.

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