DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cda4 and Cht12

DIOPT Version :9

Sequence 1:NP_728468.1 Gene:Cda4 / 33144 FlyBaseID:FBgn0052499 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster


Alignment Length:81 Identity:27/81 - (33%)
Similarity:35/81 - (43%) Gaps:11/81 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GVLLVITGA----NGQGKEKEEFQ----CPSHIANGNYADPATCRRFYQCVDGYPYLNRCPSGLF 64
            |:|.||..|    ||...||...:    ||.   :|...|...||.:::|.||......|..|.:
  Fly   366 GLLRVIFSALGDKNGLTTEKPTTEASGLCPH---DGFSRDGWDCRLYHECRDGERIYYECLEGQY 427

  Fly    65 FDDVQKFCTFKDEAKC 80
            ||:.|..|....|.||
  Fly   428 FDENQIVCRPAAEVKC 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cda4NP_728468.1 CBM_14 33..80 CDD:279884 14/46 (30%)
CE4_CDA_like_1 130..396 CDD:200596
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:299167 4/8 (50%)
Glyco_hydro_18 47..355 CDD:279094
ChtBD2 394..438 CDD:214696 15/46 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463788
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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