DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cda4 and chil-25

DIOPT Version :9

Sequence 1:NP_728468.1 Gene:Cda4 / 33144 FlyBaseID:FBgn0052499 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001300596.1 Gene:chil-25 / 188614 WormBaseID:WBGene00011846 Length:483 Species:Caenorhabditis elegans


Alignment Length:475 Identity:92/475 - (19%)
Similarity:140/475 - (29%) Gaps:175/475 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 FDDVQKFCTFKDEAKCGPLPTTPAPATEAPADTAQRCNTE----------------------NCA 107
            ||.|:|    |...      :|..|..: |..|...||..                      :..
 Worm    82 FDTVEK----KSRT------STIQPKID-PTSTVSNCNKRVVGYYSRSETSKITSVQVSKLTHAV 135

  Fly   108 LPYCFCSKDGT-------------QIPGDLEPEKIPQIIMLTFDGAVNLNNY------QHYQKIF 153
            ..:.:.:.|||             |:...:.....|..||::..|..|..|:      ::.::||
 Worm   136 FAFVYMNSDGTLKFEKQDEEDRFMQLKDIVNMGTSPVKIMISIGGKENSQNFSPVIESEYRRQIF 200

  Fly   154 DG------KRKNPNGCLIRGTFFMSHEYSNYQQIQHLGYYGHEIGTESISQQQGLQDKGY----- 207
            ..      |..:.:|.    ..|.....|.|:.:     |.|.|.  .:.||...:||.|     
 Worm   201 INSILTFLKENDLDGI----DLFWEWPCSTYKSV-----YLHFIC--ELKQQLQTKDKDYILSIV 254

  Fly   208 ------EEWVGEMIGMREILR--HFANVSVNDVVGMRAPFLKPGRNTQYKVLEDFGYIYDSSITV 264
                  ..|: :...|..|::  .|.||...|..|       |.:|       |||     .||.
 Worm   255 VPPPEVGGWI-DGFDMNNIVQIVDFINVFSLDYYG-------PTQN-------DFG-----KITG 299

  Fly   265 PPVPV-PVWPYTLDYKISHECKSGTC---PSRTFPGVWEVPLNTHYVEGYEGGHCPYLDQCVLHN 325
            |..|: ...|....:.:.|..|..:|   .|..|.  ..:|..|...|..:|            .
 Worm   300 PTAPMFNGVPGRETFNVDHTSKVLSCETMQSNKFN--IAIPFYTTLWENVQG------------P 350

  Fly   326 LDEEEVFQWL---------QEDFSRYYEQNKAPYMMPFHTNWFQTKPLENGLHKFLDWALELPDV 381
            :|:.|:|:.:         |...||...|.|...:.|:.                .|.|.....:
 Worm   351 IDKIEIFRNVNKVHGKIVGQSHMSRMIVQQKGFVLTPYS----------------FDNATRNAFI 399

  Fly   382 YILTVTQMLQYVTDPKELRDVSQIES--------WKCDK-----------------SVSVAPK-P 420
            |..:....|.:.||...:..:..:..        |..||                 :....|| .
 Worm   400 YNSSTKIYLTFETDQSIVAKIEYVSEHLLGGICIWTVDKDDEGNSQLNAISFDGLCTTGNVPKYD 464

  Fly   421 CNIWQTCALPFKIPEQ-NLT 439
            |:.|....||   |.| |||
 Worm   465 CSYWNGNTLP---PTQCNLT 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cda4NP_728468.1 CBM_14 33..80 CDD:279884 5/14 (36%)
CE4_CDA_like_1 130..396 CDD:200596 62/303 (20%)
chil-25NP_001300596.1 Glyco_18 110..439 CDD:214753 69/389 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164245
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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