DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cda4 and chil-19

DIOPT Version :10

Sequence 1:NP_728468.1 Gene:Cda4 / 33144 FlyBaseID:FBgn0052499 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_496026.2 Gene:chil-19 / 187736 WormBaseID:WBGene00011162 Length:452 Species:Caenorhabditis elegans


Alignment Length:425 Identity:79/425 - (18%)
Similarity:136/425 - (32%) Gaps:153/425 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 TTPAP------------ATEAPADTA-QRCNTENCALPYCFCSKDG-TQIPGDL----------- 124
            ||.||            ||:....|. |.....:....:...:.|| .||.|||           
 Worm    82 TTRAPPVCNKRIIGYYFATQTSVITRDQVSKLTHAVFAFVNMTSDGHLQIDGDLAKNRFTNLIEI 146

  Fly   125 EPEKIPQI-IMLTFDGAVNLNNYQHYQKIFDGKRKNPNGCLIRGTFFMSHEYSNYQQIQHLGYYG 188
            ..::.||: :|::..|..|.||::......|.|:...|..:   :|..:::..           |
 Worm   147 AKQQTPQVKVMISIGGNDNSNNFKPGLSSPDRKKLFINSTV---SFLQTYDID-----------G 197

  Fly   189 HEIGTESISQQQGLQDKGYEEWVGEMIGMREILRHFANVSVNDVVGMRAPFLKPGRNTQYKVL-- 251
            .::               |.:|.|:.  .::|...|    :||   :|....:..||....::  
 Worm   198 VDL---------------YWKWPGKT--SKDIYSQF----IND---LRYSLQRQKRNYIMSIVLP 238

  Fly   252 -EDFGYIYDSSITVPPVPVPV-------------W---------------------PYTLDYKIS 281
             .|.|..|::.|.:..:...|             |                     |....|.|.
 Worm   239 PPDMGANYEAGIDIENIFDNVDFLNIFTMGYFGPWQNDAGMITGAASQLFNGVNGVPGRKTYNIH 303

  Fly   282 HE-----CKSG-------TCPSRTFPGVW---EVPLNTHYVEGY-----EGGHCPYLDQCVLHNL 326
            |.     ||:|       ..|..|.  :|   :.|:|...:|.|     :||...  :..:...|
 Worm   304 HSTERYVCKTGQSDKYNIAIPFYTM--LWKHVKGPVNPPNIEIYRNATFQGGVVG--ETSMSRKL 364

  Fly   327 DEEEVFQWLQEDFSR--YYEQNKAPYMMPFHTNWFQTKPLENGLHKFLD------------WALE 377
            .:||.:     |||.  |..:.:|.:.....|..|.|....:.:...:|            ||::
 Worm   365 VQEEGY-----DFSNPTYNPEIRAAFKYNATTETFLTFETNDTIAAKIDYVKDRILGGVWIWAVD 424

  Fly   378 LPD--VYILTVTQMLQYVTDPKELRDVSQIESWKC 410
            :.|  ..:|.:.:...|.|       |..:..:.|
 Worm   425 MDDDSNNLLNLVKFTGYCT-------VGNLTLYNC 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cda4NP_728468.1 CBM_14 33..80 CDD:426342
CE4_CDA_like_1 130..396 CDD:200596 62/339 (18%)
chil-19NP_496026.2 Glyco_18 92..426 CDD:214753 69/380 (18%)
Blue background indicates that the domain is not in the aligned region.

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