DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cda4 and chil-8

DIOPT Version :9

Sequence 1:NP_728468.1 Gene:Cda4 / 33144 FlyBaseID:FBgn0052499 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001379090.1 Gene:chil-8 / 174541 WormBaseID:WBGene00007473 Length:399 Species:Caenorhabditis elegans


Alignment Length:330 Identity:69/330 - (20%)
Similarity:124/330 - (37%) Gaps:98/330 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 SKDGTQIPGDLEPEKIPQI----IMLTFDGAVNLNNYQHYQKIFDGKRKNPNGCLIRGTFFMSHE 174
            |.:|::|. ..:.||:..:    |::..||.:.. .|......||.|||:..  |.||...|   
 Worm    56 SDEGSEIT-IKQLEKLTHVIFAFILVHKDGTIKF-KYGTKDGFFDMKRKSME--LNRGLKVM--- 113

  Fly   175 YSNYQQIQHLGYYGHEIGTESISQQQ-------GLQDKGYE--------EW------VGEMIGMR 218
                  :...||....:.::.:.:::       .|..|.::        .|      ...:|.:|
 Worm   114 ------VSIGGYESSPLFSDVLVKKKKKLIASIALLVKKFDLDGVDIFWNWPSITDQSNYLIFIR 172

  Fly   219 EILRHFANV------SVNDVVGMRAPFLKPGRNTQYK---VLED--------FGYIYDSSITVPP 266
            |:.:...|:      |...|:.:.||.........||   :||:        |.|.|:::...|.
 Worm   173 ELRKKLTNLKDENGRSNEYVISVIAPSSSSHSEYPYKWTEILENVDFINVITFEYFYEANKIGPH 237

  Fly   267 VPVPVWPY-----TLDYKISHECKSGTCPSR---------------TFP----GVWEVPLNTHYV 307
            .|:....:     ||.|.|   |::.| |::               |.|    ||| :|.::  .
 Worm   238 SPLYGGSFGNVDDTLKYLI---CRTRT-PNKLNMVVSFNGIYWGNTTLPFDDKGVW-IPDDS--A 295

  Fly   308 EG-YEGGHCPYLDQCVLHNLDEEEVFQWLQEDFSRYYEQNKAPYMMPFHTNWFQTKPLENGLHKF 371
            :| |..|...:..  :.|..|:.: |:|        .|:.:.||:....|..|.|...|..|.:.
 Worm   296 QGPYSYGWKQFAR--MSHGFDQND-FEW--------NEETRTPYIWKADTQQFLTFENEKSLTEK 349

  Fly   372 LDWAL 376
            :::|:
 Worm   350 MNYAV 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cda4NP_728468.1 CBM_14 33..80 CDD:279884
CE4_CDA_like_1 130..396 CDD:200596 64/314 (20%)
chil-8NP_001379090.1 Glyco_18 49..369 CDD:214753 69/330 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164234
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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