DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cda4 and chil-8

DIOPT Version :10

Sequence 1:NP_728468.1 Gene:Cda4 / 33144 FlyBaseID:FBgn0052499 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001379090.1 Gene:chil-8 / 174541 WormBaseID:WBGene00007473 Length:399 Species:Caenorhabditis elegans


Alignment Length:330 Identity:69/330 - (20%)
Similarity:124/330 - (37%) Gaps:98/330 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 SKDGTQIPGDLEPEKIPQI----IMLTFDGAVNLNNYQHYQKIFDGKRKNPNGCLIRGTFFMSHE 174
            |.:|::|. ..:.||:..:    |::..||.:.. .|......||.|||:..  |.||...|   
 Worm    56 SDEGSEIT-IKQLEKLTHVIFAFILVHKDGTIKF-KYGTKDGFFDMKRKSME--LNRGLKVM--- 113

  Fly   175 YSNYQQIQHLGYYGHEIGTESISQQQ-------GLQDKGYE--------EW------VGEMIGMR 218
                  :...||....:.::.:.:::       .|..|.::        .|      ...:|.:|
 Worm   114 ------VSIGGYESSPLFSDVLVKKKKKLIASIALLVKKFDLDGVDIFWNWPSITDQSNYLIFIR 172

  Fly   219 EILRHFANV------SVNDVVGMRAPFLKPGRNTQYK---VLED--------FGYIYDSSITVPP 266
            |:.:...|:      |...|:.:.||.........||   :||:        |.|.|:::...|.
 Worm   173 ELRKKLTNLKDENGRSNEYVISVIAPSSSSHSEYPYKWTEILENVDFINVITFEYFYEANKIGPH 237

  Fly   267 VPVPVWPY-----TLDYKISHECKSGTCPSR---------------TFP----GVWEVPLNTHYV 307
            .|:....:     ||.|.|   |::.| |::               |.|    ||| :|.::  .
 Worm   238 SPLYGGSFGNVDDTLKYLI---CRTRT-PNKLNMVVSFNGIYWGNTTLPFDDKGVW-IPDDS--A 295

  Fly   308 EG-YEGGHCPYLDQCVLHNLDEEEVFQWLQEDFSRYYEQNKAPYMMPFHTNWFQTKPLENGLHKF 371
            :| |..|...:..  :.|..|:.: |:|        .|:.:.||:....|..|.|...|..|.:.
 Worm   296 QGPYSYGWKQFAR--MSHGFDQND-FEW--------NEETRTPYIWKADTQQFLTFENEKSLTEK 349

  Fly   372 LDWAL 376
            :::|:
 Worm   350 MNYAV 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cda4NP_728468.1 CBM_14 33..80 CDD:426342
CE4_CDA_like_1 130..396 CDD:200596 64/314 (20%)
chil-8NP_001379090.1 Glyco_18 49..369 CDD:214753 69/330 (21%)
Blue background indicates that the domain is not in the aligned region.

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