DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cda4 and chil-21

DIOPT Version :10

Sequence 1:NP_728468.1 Gene:Cda4 / 33144 FlyBaseID:FBgn0052499 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_496029.2 Gene:chil-21 / 174502 WormBaseID:WBGene00011164 Length:470 Species:Caenorhabditis elegans


Alignment Length:506 Identity:89/506 - (17%)
Similarity:156/506 - (30%) Gaps:172/506 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLRQCLVGVLLVITGANGQGKEKEEFQCPSHIANGNYADPATCRRFYQCVDGYPYLNRCPSGLFF 65
            :|...::.::||:...|..||.....:..|......:|                      ||.|.
 Worm    41 VLGNTIMTIILVVNDVNETGKTTITPKLSSAGTRSTFA----------------------SGFFS 83

  Fly    66 DDVQKFCTFKDEAKCGPLPTTPAP---------ATEAPADTA-QRCNTENCALPYCFCSKDG-TQ 119
            :......:..........|.||..         ||:....|. |.....:....:...:.|| .|
 Worm    84 ECTPTVTSISSTVAASTYPATPGCNKRIIGYYFATQTSVITRDQVSKLTHAVFAFVNMTSDGHLQ 148

  Fly   120 IPGDL-----------EPEKIPQI-IMLTFDGAVNLNNYQHYQKIFDGKRKNPNGCLIRGTFFMS 172
            |.|||           ..::.||: :|::..|..|.||::......|.|:...|..:   :|..:
 Worm   149 IDGDLAKNRFTNLIEIAKQQTPQVKVMISIGGNDNSNNFKPVLSSPDRKKLFINSTV---SFLQT 210

  Fly   173 HEYSNYQQIQHLGYYGHEIGTESISQQQGLQDKGYEEWVGEMIGMREILRHFANVSVNDVVGMRA 237
            ::..           |.::               |.:|.|:.  .::|...|    :||   :|.
 Worm   211 YDID-----------GVDL---------------YWKWPGKT--SKDIYSQF----IND---LRY 240

  Fly   238 PFLKPGRNTQYKVL---EDFGYIYDSSITVPPVPVPV-------------W-------------- 272
            ...:..||....::   .|.|..|::.|.:..:...|             |              
 Worm   241 SLQRQKRNYIMSIVLPPPDMGANYEAGIDIENIFDNVDFLNIFTMGYFGPWQNDAGMITGAASQL 305

  Fly   273 -------PYTLDYKISHE-----CKSG-------TCPSRTFPGVW---EVPLNTHYVEGY----- 310
                   |....|.|.|.     ||:|       ..|..|.  :|   :.|:|...:|.|     
 Worm   306 FNGVNGVPGRKTYNIHHSTERYVCKTGQSDKYNIAIPFYTM--LWKHVKGPVNPPNIEIYRNATF 368

  Fly   311 EGGHCPYLDQCVLHNLDEEEVFQWLQEDFSR--YYEQNKAPYMMPFHTNWFQTKPLENGLHKFLD 373
            :||...  :..:...|.:||.:     |||.  |..:.:|.:.....|..|.|....:.:...:|
 Worm   369 QGGVVG--ETSMSRKLVQEEGY-----DFSNPTYNPEIRAAFKYNATTETFLTFETNDTIAAKID 426

  Fly   374 ------------WALELPD--VYILTVTQMLQYVTDPKELRDVSQIESWKC 410
                        ||:::.|  ..:|.:.:...|.|       |..:..:.|
 Worm   427 YVKDRILGGVWIWAVDMDDDSNNLLNLVKFTGYCT-------VGNLTLYNC 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cda4NP_728468.1 CBM_14 33..80 CDD:426342 4/46 (9%)
CE4_CDA_like_1 130..396 CDD:200596 62/339 (18%)
chil-21NP_496029.2 Glyco_18 110..444 CDD:214753 69/380 (18%)

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