DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cda4 and chia.5

DIOPT Version :9

Sequence 1:NP_728468.1 Gene:Cda4 / 33144 FlyBaseID:FBgn0052499 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001103511.2 Gene:chia.5 / 100003900 ZFINID:ZDB-GENE-071004-113 Length:481 Species:Danio rerio


Alignment Length:216 Identity:44/216 - (20%)
Similarity:78/216 - (36%) Gaps:60/216 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 TESISQQQGLQDKGYEEWVGEMIGMREILRH--FANV-------SVNDVVGMRAPFLKPGRNT-- 246
            |.:::..:|:.|.|||        :.||.::  |.|:       |.:::.|..:|..:...:|  
Zfish   181 TAAVAAVKGIIDAGYE--------IAEIAKYLDFINIMTYDFHGSQDNITGHNSPLYRDSGDTGD 237

  Fly   247 QYKVLEDFGYIY--DSSITVPPVPVPVWPYTLDYKISHECK------SGTCPSRTF---PGVWEV 300
            |.....||...|  |....|..:.:....|...:::|....      ||...:.|:   .|.|..
Zfish   238 QIYYNTDFAMNYWRDQGAPVEKLRMGFAAYGRTFRLSSADNGVGAPASGAALAGTYTREAGFWSY 302

  Fly   301 PLNTHYVEGYEGGHCPYLDQCVLHNLDEEEV------FQWLQEDFSRYYEQNKAPYMMPFHTNWF 359
                     ||  .|.:|...::..:.:::|      .:|:..|....|| .|..|:.       
Zfish   303 ---------YE--ICTFLQGAIVQQIVDQKVPYATKGQEWVGFDDQESYE-TKVDYLK------- 348

  Fly   360 QTKPLENGLHKFLDWALELPD 380
                 |.|......|:|:|.|
Zfish   349 -----EKGFGGAFVWSLDLDD 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cda4NP_728468.1 CBM_14 33..80 CDD:279884
CE4_CDA_like_1 130..396 CDD:200596 44/216 (20%)
chia.5NP_001103511.2 Glyco_18 22..363 CDD:214753 42/213 (20%)
GH18_chitolectin_chitotriosidase 23..381 CDD:119351 44/216 (20%)
CBM_14 433..479 CDD:279884
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592040
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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