DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17598 and AT1G48040

DIOPT Version :9

Sequence 1:NP_001259780.1 Gene:CG17598 / 33140 FlyBaseID:FBgn0031194 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_175238.2 Gene:AT1G48040 / 841222 AraportID:AT1G48040 Length:383 Species:Arabidopsis thaliana


Alignment Length:511 Identity:119/511 - (23%)
Similarity:179/511 - (35%) Gaps:192/511 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 DELRASADHNVRPII-----VPRDINLLPWGTGYAECVNSGKSEWNED------QGAFC----RQ 120
            ||:|.|  .:||..|     .||      :|:|.: ||.:...|...|      .|:|.    |:
plant    34 DEVRVS--ESVRAEISGSAETPR------FGSGMS-CVTTTIGESASDFIPTIRSGSFADIRSRE 89

  Fly   121 VLSDPEHKHPD------------LPYTYFGIFDGHAGYGAALAASHQFHHILHEKLVDCLELLLP 173
            .:.| ||...|            :|..::|:||||.|..||:........:..:   |.:...:|
plant    90 TMED-EHICIDDLSAHLGSYNFSVPSAFYGVFDGHGGPEAAIFMKENLTRLFFQ---DAVFPEMP 150

  Fly   174 RDADATNGGGEGNKLNPTFPHPIYFQRRVTKDELIIGALESAFFNMDSLIAQDCDRYRDAGGCTA 238
            ...||                  :|...:........||.......:::::..|       |.||
plant   151 SIVDA------------------FFLEELENSHRKAFALADLAMADETIVSGSC-------GTTA 190

  Fly   239 CVSLFIDGKMYVANAGDSRAVLCQRRATPERPQTNTDSGIEPDPLEASCYPVPFSADH--TPETE 301
            ..:|.|...:.||||||.|||||:|             |:..|          .|.||  |.|.|
plant   191 LTALIIGRHLLVANAGDCRAVLCRR-------------GVAVD----------MSFDHRSTYEPE 232

  Fly   302 RERLLNVARLKPHLMGKHYVAMEYAKRPHIKDMGQRILCRQGTMRGWTYKTLTMEDLCMPVVNGE 366
            |.|                          |:|:|                             |.
plant   233 RRR--------------------------IEDLG-----------------------------GY 242

  Fly   367 GKRSRLLGTLGVTRGFGDHELLAINTGIQIKPFL-TPHPDVRQRDLTQVVSIPDEDNRDGDYGVL 430
            .:...|.|.|.|||..||.||.        .||. :..|.:...::.|::...|::       .|
plant   243 FEDGYLNGVLAVTRAIGDWELK--------NPFTDSSSPLISDPEIGQIILTEDDE-------FL 292

  Fly   431 VMATDGLWDV-SENDAVSRTVFQTLSKYSTEKHRYTMVAQELVARARGKINDSGHWRLADSKAAA 494
            ::|.||:||| |..:||| .|.|.|.::...:    ..|.||...|.         ||..|    
plant   293 ILACDGIWDVLSSQNAVS-NVRQGLRRHGDPR----QCAMELGKEAA---------RLQSS---- 339

  Fly   495 TVDDISVIVIPVCQYYKEHVEWTQNYKRDLEHRRRQAQAHMAQEAVNVLNGVIAEE 550
              |:::||||  |        ::.......:.:||:.:..::.||...|..::|.|
plant   340 --DNMTVIVI--C--------FSSVPSSPKQPQRRRLRFCVSDEARARLQAMLAGE 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17598NP_001259780.1 PP2Cc 98..506 CDD:238083 101/433 (23%)
AT1G48040NP_175238.2 PP2Cc 77..349 CDD:238083 97/423 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.