DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17598 and ppm1h

DIOPT Version :9

Sequence 1:NP_001259780.1 Gene:CG17598 / 33140 FlyBaseID:FBgn0031194 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_001017305.1 Gene:ppm1h / 550059 XenbaseID:XB-GENE-5872503 Length:510 Species:Xenopus tropicalis


Alignment Length:567 Identity:203/567 - (35%)
Similarity:297/567 - (52%) Gaps:116/567 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFSNFKERIISAIAPDLPPLPGNSERAIGSGSGHHHSSTHQRLRFGASGGQPMPDKFPYARPPFL 65
            ||:..|..::|.:.           ..:...||..|.:           |..:|.:|.|.||.||
 Frog     1 MFTRVKSAVVSFMG-----------GIMAGSSGLEHVN-----------GSDLPVRFSYTRPEFL 43

  Fly    66 QLLTPDELRASADHNVRPIIVPRDINLLPWGTGYAECVNSGKSEWNEDQGAFCRQVL-------- 122
            . |:|||:..||||..|||::.::...|||.|||||.:|:|||..|||| |.|..|.        
 Frog    44 G-LSPDEIECSADHIARPILILKETQRLPWSTGYAEVINAGKSTHNEDQ-ASCEVVFVKKKSGVQ 106

  Fly   123 SDP-----EHKHPDLP-----------------YTYFGIFDGHAGYGAALAASHQFHHILHEKLV 165
            |.|     ..:...||                 :.|:.:||||||.|||:.||...||.:.|::.
 Frog   107 STPNKNSSSKRRSSLPNAEGLQLKDNQEVDGITFHYWALFDGHAGAGAAVVASKLLHHHIAEQIP 171

  Fly   166 DCLELL----------LPRDADATNG------------GGEGNKLNPTFPHPIYF-QRRVTKDEL 207
            |.:::|          |..:.::|:.            ||.|...:|:.|...:| ::::..:.|
 Frog   172 DIIDILKNSAVLPPTCLGEEPESTSSNSRTLTRAASLRGGSGAPGSPSTPPTRFFTEKKIPHECL 236

  Fly   208 IIGALESAFFNMDSLIAQDCDRYRDAGGCTACVSLFIDGKMYVANAGDSRAVLCQRRATPERPQT 272
            :|||||:||..||..|.::...|..:|||||.:.:::.||:||||||||||::.:....      
 Frog   237 VIGALENAFKEMDLRIERERSTYSISGGCTALIVVYLLGKLYVANAGDSRAIIIRNGEI------ 295

  Fly   273 NTDSGIEPDPLEASCYPVPFSADHTPETERERLLNVARLKPHLMGKHYVAMEYAKRPHIKDMGQR 337
                             :|.|::.||||||:||..:|.|:|||:|..:..:|:.:|...|::|:.
 Frog   296 -----------------IPMSSEFTPETERQRLQYLAFLQPHLLGNEFTHLEFPRRVQRKEVGKM 343

  Fly   338 ILCRQGTMRGWTYKTLTMEDLCMPVVNGEGKRSRLLGTLGVTRGFGDHELLAINTGIQIKPFLTP 402
            :|.|...|.||.|||:...||..|::.||||::|::.|:|||||.|||:|...::.|.|||||:.
 Frog   344 MLYRDFNMTGWAYKTIEENDLKFPLIYGEGKKARVMATIGVTRGLGDHDLKVHDSNIYIKPFLSS 408

  Fly   403 HPDVRQRDLTQVVSIPDEDNRDGDYGVLVMATDGLWDVSENDAVSRTVFQTLSKYS-TEKHRYTM 466
            .|:||..||.|.....|:        |||:||||||||..|:.|...|...|:... .:.||||:
 Frog   409 VPEVRVYDLVQHEHSADD--------VLVLATDGLWDVLFNEEVLEAVTSFLANCDPDDPHRYTL 465

  Fly   467 VAQELVARARGKINDSGHWRLADSKAAATVDDISVIVIPVCQYYKEH 513
            .||:||.||||.:.|.| ||:::.:..:. |||||.|||:     ||
 Frog   466 AAQDLVMRARGVLKDRG-WRISNDRLGSG-DDISVYVIPL-----EH 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17598NP_001259780.1 PP2Cc 98..506 CDD:238083 170/461 (37%)
ppm1hNP_001017305.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 105..128 4/22 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 188..225 7/36 (19%)
PP2Cc <224..503 CDD:238083 127/311 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 100 1.000 Domainoid score I6911
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 317 1.000 Inparanoid score I2502
OMA 1 1.010 - - QHG48683
OrthoDB 1 1.010 - - D272116at33208
OrthoFinder 1 1.000 - - FOG0004127
OrthoInspector 1 1.000 - - oto103959
Panther 1 1.100 - - LDO PTHR13832
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2968
SonicParanoid 1 1.000 - - X2870
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.110

Return to query results.
Submit another query.