DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17598 and alph

DIOPT Version :9

Sequence 1:NP_001259780.1 Gene:CG17598 / 33140 FlyBaseID:FBgn0031194 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster


Alignment Length:484 Identity:97/484 - (20%)
Similarity:167/484 - (34%) Gaps:192/484 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 SGKSEWNE--DQGAFCRQVLSDPEHKHPDLPYTYFGIFDGHAGYGAALAASHQFHHILHEKLVDC 167
            |....|..  :...:.|..|.|   ..||  :::|.:||||||   ...:.|...|:| |.::..
  Fly    27 SSMQGWRSEMEDAYYARAGLGD---ALPD--WSFFAVFDGHAG---CKVSEHCAKHLL-ESIIST 82

  Fly   168 LELLLPRDADATNGGGEGNKLNPTFPHPIYFQRRVTKDELIIGALESAFFNMDSLIAQDCDRYRD 232
            .|.:          ||:..|                       .:.:.|..:|.::.:..:..|:
  Fly    83 EEFI----------GGDHVK-----------------------GIRTGFLRIDEVMRELPEFTRE 114

  Fly   233 AGGC--TACVSLFID-GKMYVANAGDSRAVLCQRRATPERPQTNTDSGIEPDPLEASCYPVPFSA 294
            :..|  |..|..|:. .::|:||.||||||||::             |:          ||..:.
  Fly   115 SEKCGGTTAVCAFVGLTQVYIANCGDSRAVLCRQ-------------GV----------PVFATQ 156

  Fly   295 DHTP--ETERERLLNVARLKPHLMGKHYVAMEYAKRPHIKDMGQRILCRQGTMRGWTYKTLTMED 357
            ||.|  ..|:||:.|.                          |..::.:                
  Fly   157 DHKPILPEEKERIYNA--------------------------GGSVMIK---------------- 179

  Fly   358 LCMPVVNGEGKRSRLLGTLGVTRGFGDHELLAINTGIQIKPFLTPHPDV----RQRDLTQVVSIP 418
                         |:.|||.|:|..||::...:....|.:..::|.|::    ||          
  Fly   180 -------------RVNGTLAVSRALGDYDFKNVKEKGQCEQLVSPEPEIFCQSRQ---------- 221

  Fly   419 DEDNRDGDYGVLVMATDGLWDVSENDAVSRTVFQTLSKYSTEKHRYTMVAQELVARARGKINDSG 483
            |.|.      .||:|.||:|||..|:.|...:           |....|...||:.|...::...
  Fly   222 DSDE------FLVLACDGIWDVMSNEDVCSFI-----------HSRMRVTSNLVSIANQVVDTCL 269

  Fly   484 HWRLADSKAAATVDDISVIVI-------PVCQYYKEHVEWTQNYKRDLEH-RRRQAQAHMAQEAV 540
            |        ..:.|::|:|:|       |.    :|.:|.....::.:|. .|.:.::....:.|
  Fly   270 H--------KGSRDNMSIIIIAFPGAPKPT----EEAIEAEHRLEKQIEKITRDEIESSKITDYV 322

  Fly   541 NVL--------------NGVIAEEAHVVE 555
            ::|              .|.:..:.||:|
  Fly   323 DLLKCLQNRDDIEGLPPGGGLQSKYHVIE 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17598NP_001259780.1 PP2Cc 98..506 CDD:238083 86/418 (21%)
alphNP_651701.1 PP2Cc 24..284 CDD:238083 86/411 (21%)
PP2C_C 278..352 CDD:285117 14/78 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445114
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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