DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17598 and Ppm1n

DIOPT Version :10

Sequence 1:NP_608468.1 Gene:CG17598 / 33140 FlyBaseID:FBgn0031194 Length:651 Species:Drosophila melanogaster
Sequence 2:XP_038959919.1 Gene:Ppm1n / 292690 RGDID:1562091 Length:409 Species:Rattus norvegicus


Alignment Length:373 Identity:93/373 - (24%)
Similarity:124/373 - (33%) Gaps:153/373 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 RPIIVPRDINLLPWGTGYAECVNSGKSE---WN---EDQGAFCRQVLSDPEHKHPDLP--YTYFG 138
            |.::.||....|..|...|..:..|.|.   |.   ||  |.|.|:..      |.||  :.:|.
  Rat    37 RLLVAPRCWQRLHGGAAAASGLRFGASAVQGWRARMED--AHCAQLAL------PGLPSGWAFFA 93

  Fly   139 IFDGHAGYGAA-LAASHQFHHILHEKLVDCLELL--LPRDADATNGGGEGNKLNPTFPHPIYFQR 200
            :.|||.|..|| ..|.|...|:|.|        |  .||:.|.                      
  Rat    94 VLDGHGGARAARFGARHLPGHVLGE--------LGPAPREPDG---------------------- 128

  Fly   201 RVTKDELIIGALESAFFNMDSLIAQDCDRYRDAGGCTACVSLFIDGKMYVANAGDSRAVLCQRRA 265
                   :..||.|||.:.||.:::...|. |.||.||...|.....:|:|:.|||||:|.:..:
  Rat   129 -------VRQALRSAFLHADSQLSKLWPRC-DPGGSTAVALLVSPRFLYLAHCGDSRALLSRSGS 185

  Fly   266 TPERPQTNTDSGIEPDPLEASCYPVPFSADHTPETERERLLNVARLKPHLMGKHYVAMEYAKRPH 330
            .                  |.|     :.||.|...||                        |..
  Rat   186 V------------------AFC-----TEDHRPHRPRE------------------------RER 203

  Fly   331 IKDMGQRILCRQGTMRGWTYKTLTMEDLCMPVVNGEGKRSRLLGTLGVTRGFGDHELLAINTGIQ 395
            |.|.|       ||:|                      |.|:.|:|.|:|..||           
  Rat   204 IHDAG-------GTVR----------------------RRRVEGSLAVSRALGD----------- 228

  Fly   396 IKPFLTPHPDVRQRDLTQVVSIPDE----DNRDGDYGVLVMATDGLWD 439
               |.......|..:| |:||...|    ..:|.|..|| :|:||:||
  Rat   229 ---FAYKQAPGRPPEL-QLVSAEPEVAALARQDEDEFVL-LASDGVWD 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17598NP_608468.1 PP2Cc 98..506 CDD:238083 88/357 (25%)
Ppm1nXP_038959919.1 PP2Cc 59..319 CDD:238083 87/351 (25%)
PP2C_C 313..>345 CDD:429684
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.