DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17598 and Pdp2

DIOPT Version :9

Sequence 1:NP_001259780.1 Gene:CG17598 / 33140 FlyBaseID:FBgn0031194 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_659559.2 Gene:Pdp2 / 246311 RGDID:628812 Length:530 Species:Rattus norvegicus


Alignment Length:620 Identity:134/620 - (21%)
Similarity:206/620 - (33%) Gaps:272/620 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 AIGSGSGH---------HHSSTHQRLRFGASGGQPMPDKFPYARPPFLQLLTPDE----LRA-SA 77
            |:...|.|         .|:||.:.                    .|...|:|::    ||| .:
  Rat    48 AVNDSSPHGGFALRKAYRHTSTEEE--------------------DFHLQLSPEQVSDLLRAGES 92

  Fly    78 DHNVRPIIVPRDINLLPWGTGYAECV-------NSGKSEWNEDQG-AFCRQVLSDPEHKHPDLPY 134
            .|.|           |.:.:|....|       .:..|...:.|| |.|.|...           
  Rat    93 SHKV-----------LDFNSGVPNSVLRFESNQLAANSPVEDRQGVASCVQTRG----------- 135

  Fly   135 TYFGIFDGHAGYGAALAASHQFHH-----ILHEKLVDCLELLLPRDADATNGGGEGNKLNPTFP- 193
            |.|||||||.|:..|.|.|.:..:     ::..|.::.:|..:             ..:.|..| 
  Rat   136 TMFGIFDGHGGHACAQAVSERLFYYMAVSLMSHKTLEQMEEAM-------------ENMKPLLPI 187

  Fly   194 -----HP-----------------IYFQR--------RVTKDELIIGALESAFFNMDSLIAQDCD 228
                 ||                 :|:|.        .::.:|    ||..:|..:||.|:.:..
  Rat   188 LQWLKHPGDSIYKDITSVHLDHLRVYWQELLDLHMETGLSTEE----ALMYSFQRLDSDISLEIQ 248

  Fly   229 RYRD------------AGGCTACVSLFIDG-KMYVANAGDSRAVLCQRRATPERPQTNTDSGIEP 280
            ...:            ..|.|||:: .:|| .:::|||||.||:|                |::.
  Rat   249 APLEDEVTKNLSLQVAFSGATACMA-HVDGVHLHIANAGDCRAIL----------------GVQG 296

  Fly   281 DPLEASCYPVPFSADHTPETERERLLNVARLKPHLMGKHYVAMEYAKRPHIKDMGQRILCRQGTM 345
            |....||  :|.:.||....|.|    ::|||             .:.|..:|            
  Rat   297 DNGAWSC--LPLTCDHNAWNEAE----LSRLK-------------REHPESED------------ 330

  Fly   346 RGWTYKTLTMEDLCMPVVNGEGKRSRLLGTLGVTRGFGDHELL--------AINTGIQIK----- 397
                 :||.::|             ||||.|...|.|||.:|.        .:..|...:     
  Rat   331 -----RTLIIDD-------------RLLGVLLPCRAFGDVQLKWSKELQRNVLERGFDTEALNIY 377

  Fly   398 ----------PFLTPHPDVRQRDLTQVVSIPDEDNRDGDYGVLVMATDGLWDVSENDAVSRTVFQ 452
                      |:||..|:|....|.     |.:.       .||:|:|||||:.:|:.|.|.|..
  Rat   378 QFTPPHYHTPPYLTAKPEVTYHRLR-----PQDK-------FLVLASDGLWDMLDNEDVVRLVVG 430

  Fly   453 TLSKYSTEK-----------HRYTMVAQ---------------ELVARARGKINDSGHW---RLA 488
            .|||...:|           |..:::.|               .|:..|.|. |:.|..   |||
  Rat   431 HLSKVGHQKPALDQRPANLGHMQSLLLQRKASGLHAADQNAATHLIRHAIGS-NEYGEMEPERLA 494

  Fly   489 ------DSKAAATVDDISVIVI-----PVCQYYKE 512
                  :..|....|||:|:|:     .:..|:||
  Rat   495 AMLTLPEDVARMYRDDITVMVVFFNSESIDTYFKE 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17598NP_001259780.1 PP2Cc 98..506 CDD:238083 116/527 (22%)
Pdp2NP_659559.2 PP2Cc 96..516 CDD:214625 117/537 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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