DRSC/TRiP Functional Genomics Resources

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Protein Alignment S6kII and Rps6kb1

DIOPT Version :10

Sequence 1:NP_523437.2 Gene:S6kII / 33139 FlyBaseID:FBgn0262866 Length:911 Species:Drosophila melanogaster
Sequence 2:XP_063126049.1 Gene:Rps6kb1 / 83840 RGDID:620683 Length:546 Species:Rattus norvegicus


Alignment Length:498 Identity:214/498 - (42%)
Similarity:301/498 - (60%) Gaps:50/498 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 ELMELSDSESQGGVETGGR-----REGATGRSAPDLEDTEPLYETENEFELKEV-IKEGHDKADP 196
            :|.:..|:.|:..:|.||:     ..|..|.....:|..|       :||:.|. :..|.:|..|
  Rat    31 DLDQPEDAGSEDELEEGGQLNESMDHGGVGPYELGMEHCE-------KFEISETSVNRGPEKIRP 88

  Fly   197 SQFELLRVLGEGSFGKVFLVRKIIGKDAGTLYAMKVLKKATL--KVKDRVRSTNERKILADVGHA 259
            ..||||||||:|.:||||.|||:.|.:.|.::||||||||.:  ..||...:..||.||.:|.|.
  Rat    89 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 153

  Fly   260 FIVRLHYAFQTPGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAMNHLHTLGIIYRD 324
            |||.|.|||||.|||||||::|.||:||.:|.:|.:|.|:...|||||:::|:.|||..||||||
  Rat   154 FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRD 218

  Fly   325 LKPENILLDEHGHIALTDFGLSKQPL-DGSKTYSFCGTVEYMAPEIVNRKGHDFAADWWSFGVLM 388
            ||||||:|:..||:.||||||.|:.: ||:.|::||||:|||||||:.|.||:.|.||||.|.||
  Rat   219 LKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALM 283

  Fly   389 YEMLTGNLPFHGQTRQETMNQILRSKLGMPENLSPEAQSLLRALFKRNPQNRLGAGAQGILDIKA 453
            |:||||..||.|:.|::|:::||:.||.:|..|:.||:.||:.|.|||..:|||||.....:::|
  Rat   284 YDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 348

  Fly   454 HCFFATIDWVRLERKQVRPPFIPAV-SRDDAFYFDVEYTSKSPRDSP-GGPISASAHEIFRGFSF 516
            |.||..|:|..|..::|.|||.|.: |.:|...||.::|.::|.||| ...:|.||:::|.||::
  Rat   349 HPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDSTLSESANQVFLGFTY 413

  Fly   517 VAPVLLEGQCAGSNMCSTSASPLHSIAPIPAAP---VGAPRTLPGVLPGNFHAEYNLLQE----- 573
            |||.:||           |.....|..|...:|   :|:|||     |..:   :.||..     
  Rat   414 VAPSVLE-----------SVKEKFSFEPKIRSPRRFIGSPRT-----PVRY---FRLLYSFFLFM 459

  Fly   574 LGRGTFSVCRLCEHRASKKHYAVKVIEKAAVAAASTSTSADCW 616
            |......||| |..|  |:.:.:.:.:..:::.|.|...  ||
  Rat   460 LLYACPCVCR-CIQR--KQPWVLLLTQSLSLSLAGTWLV--CW 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S6kIINP_523437.2 STKc_RSK_N 203..517 CDD:270734 167/318 (53%)
STKc_RSK_C 567..883 CDD:270993 13/55 (24%)
Rps6kb1XP_063126049.1 None

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