DRSC/TRiP Functional Genomics Resources

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Protein Alignment S6kII and RSH3

DIOPT Version :10

Sequence 1:NP_523437.2 Gene:S6kII / 33139 FlyBaseID:FBgn0262866 Length:911 Species:Drosophila melanogaster
Sequence 2:NP_173094.4 Gene:RSH3 / 838214 AraportID:AT1G16440 Length:499 Species:Arabidopsis thaliana


Alignment Length:517 Identity:137/517 - (26%)
Similarity:232/517 - (44%) Gaps:150/517 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SSSNNAEQQCSSSGLGLQLRQRMQITSSGCSSLAVTPMEHTPTEDDESGGGNSGVTSSVTTVTSS 91
            |:||::..:|                           .:..|.:|.:.            .|..:
plant    20 SASNSSNHKC---------------------------QQQKPRKDKQK------------QVEQN 45

  Fly    92 QRRQQLQQVQQQSALQAALEQHHISPTADLDSARKRPTHRTLCPPPELMELSDSESQGGVETGGR 156
            .::.:..|::.:|.|  .:..|:::.::..:::....|:.:..|                .||| 
plant    46 TKKIEEHQIKSESTL--LISNHNVNMSSQSNNSESTSTNNSSKP----------------HTGG- 91

  Fly   157 REGATGRSAPDLEDTEPLYETENEFELKEVIKEGHDKADPSQFELLRVLGEGSFGKVFLVRKIIG 221
                      |:.     ::..|..:.:.:      |...|.|.:|:.||.|..|.|:|| ::.|
plant    92 ----------DIR-----WDAVNSLKSRGI------KLGISDFRVLKRLGYGDIGSVYLV-ELKG 134

  Fly   222 KDAGTLYAMKVLKKATLKVKDR-VRSTNERKILADVGHAFIVRLHYAFQTPGKLYLILDFLRGGD 285
            .:..|.:||||:.||:|..::: :|:..||:||:.:.|.|:..|:..|:|.....|:::|..||:
plant   135 ANPTTYFAMKVMDKASLVSRNKLLRAQTEREILSQLDHPFLPTLYSHFETDKFYCLVMEFCSGGN 199

  Fly   286 LFTRLSKE--VMFTEEDVKFYLAELALAMNHLHTLGIIYRDLKPENILLDEHGHIALTDFGL--- 345
            |::...|:  ..|||:..:|:.:|:.||:.:||.|||:||||||||:|:.:.|||.|:||.|   
plant   200 LYSLRQKQPNKCFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLR 264

  Fly   346 ------------------------------------------------SKQPLDGS--------- 353
                                                            ||...|||         
plant   265 CSVNPTLVKSFNGGGTTGIIDDNAAVQGCYQPSAFFPRMLQSSKKNRKSKSDFDGSLPELMAEPT 329

  Fly   354 --KTYSFCGTVEYMAPEIVNRKGHDFAADWWSFGVLMYEMLTGNLPFHGQTRQETMNQILRSKLG 416
              |:.||.||.||:||||:..:||..|.|||:||:.:||:|.|..||.||..:.|:..::...|.
plant   330 NVKSMSFVGTHEYLAPEIIKNEGHGSAVDWWTFGIFIYELLHGATPFKGQGNKATLYNVIGQPLR 394

  Fly   417 MPE--NLSPEAQSLLRALFKRNPQNRLGAGAQGILDIKAHCFFATIDWVRLERKQVRPPFIP 476
            .||  .:|..|:.|::.|..:.||||: |..:|..:||.|.||..::|..:..:  .||.:|
plant   395 FPEYSQVSSTAKDLIKGLLVKEPQNRI-AYKRGATEIKQHPFFEGVNWALIRGE--TPPHLP 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S6kIINP_523437.2 STKc_RSK_N 203..517 CDD:270734 115/341 (34%)
STKc_RSK_C 567..883 CDD:270993
RSH3NP_173094.4 STKc_phototropin_like 111..457 CDD:270726 118/347 (34%)
Blue background indicates that the domain is not in the aligned region.

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