DRSC/TRiP Functional Genomics Resources

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Protein Alignment S6kII and rps6ka1

DIOPT Version :9

Sequence 1:NP_001259779.1 Gene:S6kII / 33139 FlyBaseID:FBgn0262866 Length:911 Species:Drosophila melanogaster
Sequence 2:NP_001071243.1 Gene:rps6ka1 / 777728 ZFINID:ZDB-GENE-060929-516 Length:310 Species:Danio rerio


Alignment Length:329 Identity:175/329 - (53%)
Similarity:218/329 - (66%) Gaps:28/329 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   577 GTFSVCRLCEHRASKKHYAVKVIEKAAVAAASTSTSADCWEEVEIMLRYGNHPNIVTLYSVYEDA 641
            |:||||:.|.|:.:...||||||:|         ||.|..||:||:||||.||||:||..||::.
Zfish     2 GSFSVCKRCIHKVTNTEYAVKVIDK---------TSTDPTEEIEILLRYGQHPNIITLKDVYDNG 57

  Fly   642 GSAYLVMELLKGGELLDRILAVGQMCESEASAVLRTIASAVAYLHEHGVVHRDLKPSNMIYASMR 706
            ...|||.||::|||||||||......|.||||||.||...|.|||..|||||||||||::|....
Zfish    58 KQVYLVTELMRGGELLDRILKQKFFSEREASAVLHTITKTVEYLHSQGVVHRDLKPSNILYVDES 122

  Fly   707 QTPETLKLCDLGFAKQLRADNGLLMTPCYTANFVAPEVLKRQGYDLACDIWSLGVLLYIMLSGRT 771
            ..||:|::||.||||||||||||||||||||||||||||||||||..|||||||||||.|::|.|
Zfish   123 GNPESLRICDFGFAKQLRADNGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGVLLYTMIAGFT 187

  Fly   772 PFASTPNDSPDVILKRIGSGQIDFTSSRWALISVPAKELLRQMLHIVPENRPTAARILEHDWLRE 836
            |||:.|.|:|:.||.|||||:...|...|..:|..||:|:.:|||:.|..|.||.::|:|.|:  
Zfish   188 PFANGPEDTPEEILSRIGSGRFTLTGGNWDAVSDAAKDLVSKMLHVDPHQRLTARQVLKHPWI-- 250

  Fly   837 QFAGGVQLTEYAVAPGSQLSLGAQQQQQNHISMALRGAVDATFRAIAIPQ-AANVGPVELSMLAK 900
                 ||..:   .|.|||        |:..:..::||:.||:.|:...| ...:.|:|.|.||:
Zfish   251 -----VQRDK---LPNSQL--------QHQDAKLVKGAMAATYSALKSSQPPPELKPIESSFLAQ 299

  Fly   901 RRAK 904
            ||.|
Zfish   300 RRVK 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S6kIINP_001259779.1 S_TKc 199..457 CDD:214567
STKc_RSK_N 203..517 CDD:270734
STKc_RSK_C 567..883 CDD:270993 166/305 (54%)
S_TKc 568..834 CDD:214567 153/256 (60%)
rps6ka1NP_001071243.1 PKc_like 1..281 CDD:304357 166/305 (54%)
S_TKc 2..250 CDD:214567 153/256 (60%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 398 1.000 Domainoid score I709
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 828 1.000 Inparanoid score I444
OMA 1 1.010 - - QHG55819
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000787
OrthoInspector 1 1.000 - - otm24234
orthoMCL 1 0.900 - - OOG6_101790
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X611
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.870

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