DRSC/TRiP Functional Genomics Resources

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Protein Alignment S6kII and prkcd

DIOPT Version :10

Sequence 1:NP_523437.2 Gene:S6kII / 33139 FlyBaseID:FBgn0262866 Length:911 Species:Drosophila melanogaster
Sequence 2:XP_002934267.1 Gene:prkcd / 733756 XenbaseID:XB-GENE-478663 Length:683 Species:Xenopus tropicalis


Alignment Length:401 Identity:147/401 - (36%)
Similarity:217/401 - (54%) Gaps:41/401 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 MELSDSESQGGVETGGRREGAT----GRSAPDLEDTEPLYETENEFELKEVIKEGHD-------- 192
            |:.|..:|..|::.....:|..    |...||        .|:|:::.   :.||..        
 Frog   295 MKSSSRKSDSGLDNIAIYQGVNPKTPGLPMPD--------ATDNQYDR---LWEGSSPHPHISLS 348

  Fly   193 ---KADPSQFELLRVLGEGSFGKVFLVRKIIGKDAGTLYAMKVLKKATLKVKDRVRSTN-ERKIL 253
               |.|  .|...:|||:|||||| |:.::.||  |..:|:|.|||..:.:.|.|..|. |:::|
 Frog   349 SRLKID--NFVFHKVLGKGSFGKV-LLAELKGK--GEYFAIKALKKDVVLIDDDVECTMVEKRVL 408

  Fly   254 ADV-GHAFIVRLHYAFQTPGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAMNHLHT 317
            |.. .:.|:..::.:|||...|:.:::||.||||...:..:..|......||.:|:...:..||:
 Frog   409 ALAWENPFLTHIYCSFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYASEIICGLQFLHS 473

  Fly   318 LGIIYRDLKPENILLDEHGHIALTDFGLSKQPLDG-SKTYSFCGTVEYMAPEIVNRKGHDFAADW 381
            .||||||||.:|::||:.|||.:.|||:.|:.:.| :|..:||||.:|:||||:....:.|:.||
 Frog   474 KGIIYRDLKLDNVMLDKDGHIKIADFGMCKENVYGDNKASTFCGTPDYIAPEILQGLKYTFSVDW 538

  Fly   382 WSFGVLMYEMLTGNLPFHGQTRQETMNQILRSKLGMPENLSPEAQSLLRALFKRNPQNRLGAGAQ 446
            ||||||:||||.|..||||....|....|.:.....|..::.|::.:|..||:|.|..|||.   
 Frog   539 WSFGVLLYEMLIGQSPFHGDDEDELFESIRQDTPHYPRWITKESKDILERLFEREPTKRLGV--- 600

  Fly   447 GILDIKAHCFFATIDWVRLERKQVRPPFIPAV-SRDDAFYFDVEYTSKSPR--DSPGGPISASAH 508
             :.:||.|.||.||:|..|||:::.|||.|.| |..|...||.|:.|:.||  .|....|.:...
 Frog   601 -VGNIKVHPFFKTINWTALERRELEPPFKPKVKSPSDYSNFDREFLSEKPRLSFSDKNLIDSMDQ 664

  Fly   509 EIFRGFSFVAP 519
            ..|.||||:.|
 Frog   665 SAFHGFSFINP 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S6kIINP_523437.2 STKc_RSK_N 203..517 CDD:270734 130/319 (41%)
STKc_RSK_C 567..883 CDD:270993
prkcdXP_002934267.1 C1_nPKC_theta-like_rpt1 151..211 CDD:410384
C1_nPKC_theta-like_rpt2 230..279 CDD:410387
STKc_nPKC_delta 360..675 CDD:173710 131/321 (41%)
Blue background indicates that the domain is not in the aligned region.

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