DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment S6kII and Rps6kb2

DIOPT Version :9

Sequence 1:NP_001259779.1 Gene:S6kII / 33139 FlyBaseID:FBgn0262866 Length:911 Species:Drosophila melanogaster
Sequence 2:NP_067460.1 Gene:Rps6kb2 / 58988 MGIID:1927343 Length:485 Species:Mus musculus


Alignment Length:440 Identity:196/440 - (44%)
Similarity:264/440 - (60%) Gaps:36/440 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 EGATGRSAPDLE--DTEPLYETE----------NEFELKE-VIKEGHDKADPSQFELLRVLGEGS 209
            ||:.|...|:..  |..||.|..          .|.||.| .:..|.::..|..||||.|||:|.
Mouse    13 EGSEGEGEPEFSPADVCPLGELRAAGLETVGHYEEVELTESSVNLGPERIGPHCFELLSVLGKGG 77

  Fly   210 FGKVFLVRKIIGKDAGTLYAMKVLKKATL--KVKDRVRSTNERKILADVGHAFIVRLHYAFQTPG 272
            :||||.|||:.|.:.|.:||||||:||.:  ..||...:..||.||..|.|.|||.|.|||||.|
Mouse    78 YGKVFQVRKVQGTNLGKIYAMKVLRKAKIVCSAKDTAHTRAERNILESVKHPFIVELAYAFQTGG 142

  Fly   273 KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAMNHLHTLGIIYRDLKPENILLDEHGH 337
            ||||||:.|.||:|||.|.:|.:|.|:...|||||:.||:.|||:.||||||||||||:|...||
Mouse   143 KLYLILECLSGGELFTHLEREGIFLEDTACFYLAEITLALGHLHSHGIIYRDLKPENIMLSSQGH 207

  Fly   338 IALTDFGLSKQPL-DGSKTYSFCGTVEYMAPEIVNRKGHDFAADWWSFGVLMYEMLTGNLPFHGQ 401
            |.||||||.|:.: :|:.|::||||:|||||||:.|.||:.|.||||.|.|||:||||:.||..:
Mouse   208 IKLTDFGLCKESIHEGAITHTFCGTIEYMAPEILVRTGHNRAVDWWSLGALMYDMLTGSPPFTAE 272

  Fly   402 TRQETMNQILRSKLGMPENLSPEAQSLLRALFKRNPQNRLGAGAQGILDIKAHCFFATIDWVRLE 466
            .|::||::|::.||.:|..|:|:|:.|.:...||||..|:|.|.....|::.|.||..|:|..|.
Mouse   273 NRKKTMDKIIKGKLVLPPYLTPDARDLAKKFLKRNPTQRIGGGLGDAADVQRHPFFRHINWDDLL 337

  Fly   467 RKQVRPPFIPAV-SRDDAFYFDVEYTSKSPRDSPGG-PISASAHEIFRGFSFVAPVLLEGQCAG- 528
            .::|.|||.|:: |.:|...||..:|.::|.|||.. .:|.||::.|.||::|||.:|:....| 
Mouse   338 ARRVDPPFRPSLQSEEDVSQFDARFTRQTPVDSPDDTALSESANQAFLGFTYVAPSVLDSIKEGF 402

  Fly   529 -----------------SNMCSTSASPLHSIAPIPAAPVGAPRTLPGVLP 561
                             :.:.....||.....|.|..|.....:||.:||
Mouse   403 SFQPKLRSPRRLNSSPRTPISPLKFSPFEGFRPSPGPPEPMEPSLPPLLP 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S6kIINP_001259779.1 S_TKc 199..457 CDD:214567 143/260 (55%)
STKc_RSK_N 203..517 CDD:270734 164/318 (52%)
STKc_RSK_C 567..883 CDD:270993
S_TKc 568..834 CDD:214567
Rps6kb2NP_067460.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 4/12 (33%)
S_TKc 67..328 CDD:214567 143/260 (55%)
STKc_p70S6K 70..392 CDD:270736 166/321 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 407..485 9/46 (20%)
Nuclear localization signal. /evidence=ECO:0000250 474..480
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1132245at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R469
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.950

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