DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment S6kII and rps6kb1a

DIOPT Version :9

Sequence 1:NP_001259779.1 Gene:S6kII / 33139 FlyBaseID:FBgn0262866 Length:911 Species:Drosophila melanogaster
Sequence 2:XP_021327969.1 Gene:rps6kb1a / 562242 ZFINID:ZDB-GENE-091113-52 Length:506 Species:Danio rerio


Alignment Length:429 Identity:197/429 - (45%)
Similarity:275/429 - (64%) Gaps:30/429 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 PPELMELSDSESQGGVETGGRREGATGRSAPDLEDTEPLYETENEFELKE-VIKEGHDKADPSQF 199
            ||| ..:||.|...|.:.....:..:|...  :||.|       :||:.| .:.:|.:|..|..|
Zfish    11 PPE-DNVSDEELSDGAKINEYIDQCSGFEF--MEDCE-------KFEISEDSVNQGTEKIRPECF 65

  Fly   200 ELLRVLGEGSFGKVFLVRKIIGKDAGTLYAMKVLKKATL--KVKDRVRSTNERKILADVGHAFIV 262
            |||||||:|.:||||.|||:.|..:|.::||||||||.:  ..||...:..||.||.:|.|.|||
Zfish    66 ELLRVLGKGGYGKVFQVRKVAGAASGKIFAMKVLKKAMIVRNAKDTAHTKAERSILEEVKHPFIV 130

  Fly   263 RLHYAFQTPGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAMNHLHTLGIIYRDLKP 327
            .|.|||||..||||||::|.||:||.:|.:|.:|.|:...|||||::||:.|||..|||||||||
Zfish   131 DLIYAFQTGEKLYLILEYLSGGELFMQLEREGIFLEDTACFYLAEISLALGHLHQKGIIYRDLKP 195

  Fly   328 ENILLDEHGHIALTDFGLSKQPL-DGSKTYSFCGTVEYMAPEIVNRKGHDFAADWWSFGVLMYEM 391
            |||:|:.:||:.||||||.|:.: ||:.|::||||:|||||||:.|.||:.|.||||.|.|||:|
Zfish   196 ENIMLNYNGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILTRSGHNRAVDWWSLGALMYDM 260

  Fly   392 LTGNLPFHGQTRQETMNQILRSKLGMPENLSPEAQSLLRALFKRNPQNRLGAGAQGILDIKAHCF 456
            |||..||..:.|::|:::||:.||.:|..|:.||:.||:.|.|||...|:||..:.:|||:.|.|
Zfish   261 LTGAPPFTAENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNASVRIGASPRDVLDIQRHSF 325

  Fly   457 FATIDWVRLERKQVRPPFIPAV-SRDDAFYFDVEYTSKSPRDSPGG-PISASAHEIFRGFSFVAP 519
            |..|:|..|...::.|||.|.: |.||...||.::||::|.|||.. .:|.|.:::|.||:::||
Zfish   326 FRHINWDDLLAFKIDPPFKPFLQSADDVSQFDSKFTSQTPVDSPDDTKLSESDNQVFLGFTYIAP 390

  Fly   520 VLLEGQCAGSNMCSTSASPLHSIAPIPAAP---VGAPRT 555
            .:||           :.....:..|...:|   :|:|||
Zfish   391 SVLE-----------NIKEKFTFEPKSRSPRKVLGSPRT 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S6kIINP_001259779.1 S_TKc 199..457 CDD:214567 145/260 (56%)
STKc_RSK_N 203..517 CDD:270734 166/318 (52%)
STKc_RSK_C 567..883 CDD:270993
S_TKc 568..834 CDD:214567
rps6kb1aXP_021327969.1 STKc_p70S6K 68..390 CDD:270736 167/321 (52%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1132245at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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