DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment S6kII and rps6ka4

DIOPT Version :9

Sequence 1:NP_001259779.1 Gene:S6kII / 33139 FlyBaseID:FBgn0262866 Length:911 Species:Drosophila melanogaster
Sequence 2:XP_005165672.1 Gene:rps6ka4 / 561959 ZFINID:ZDB-GENE-060526-284 Length:786 Species:Danio rerio


Alignment Length:793 Identity:324/793 - (40%)
Similarity:444/793 - (55%) Gaps:99/793 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 GRREGATGRSAPDLEDTEPLYETEN-----EFELKEVIKEGH-DKADPSQFELLRVLGEGSFGKV 213
            |...|::|      ||::  .||..     :.|:......|: :|.....||||:|||.|::|||
Zfish     3 GDSSGSSG------EDSD--RETRRKVCTVKHEITNANLTGYTEKVGMENFELLKVLGTGAYGKV 59

  Fly   214 FLVRKIIGKDAGTLYAMKVLKKATL--KVKDRVRSTNERKILADVGHA-FIVRLHYAFQTPGKLY 275
            ||||||.|.|.|.||||||||||.:  |.|....:..||::|..:..: |:|.|||||||..||:
Zfish    60 FLVRKISGHDKGKLYAMKVLKKAAIVQKAKTAEHTRTERQVLEHIRQSPFLVTLHYAFQTQTKLH 124

  Fly   276 LILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAMNHLHTLGIIYRDLKPENILLDEHGHIAL 340
            ||||::.||::||.|.:...|:|::|:.|:.|:.||:.|||.|||:|||:|.||||||..||:.|
Zfish   125 LILDYVSGGEMFTHLYQRDHFSEDEVRIYVGEIILALEHLHKLGIVYRDIKLENILLDSDGHVVL 189

  Fly   341 TDFGLSKQPLDGSK--TYSFCGTVEYMAPEIVNRK-GHDFAADWWSFGVLMYEMLTGNLPF--HG 400
            |||||||:.|:..|  |||||||:|||||||:..| ||..|.||||.|:||:|:|||..||  .|
Zfish   190 TDFGLSKEFLEEEKERTYSFCGTIEYMAPEIIRGKSGHGKAVDWWSLGILMFELLTGASPFTLEG 254

  Fly   401 Q--TRQETMNQILRSKLGMPENLSPEAQSLLRALFKRNPQNRLGAGAQGILDIKAHCFFATIDWV 463
            :  ::.|...:|||.:...|..:.|.||.|||.|..::|..|||:|.:|..:||.|.||..::|.
Zfish   255 ERNSQSEVSKRILRCEPPFPSIIGPLAQDLLRKLIVKDPHKRLGSGPRGAEEIKGHPFFKGLNWS 319

  Fly   464 RLERKQVRPPFIPAVSRD--DAFYFDVEYTSKSPRDSPGGPISASAHEIFRGFSFVAPVLLEGQC 526
            .|..|:|:.||.|.: ||  |...|..|:|...|..||.. ...|...:|:|:|||||.:|    
Zfish   320 DLAEKKVQSPFRPEL-RDELDVGNFAEEFTGMEPVYSPAS-TPPSTDRLFQGYSFVAPSIL---- 378

  Fly   527 AGSNMCSTSASPLHSIAPIPAAPVGAPRTLPG---------VLPGNFHAEYNLLQE---LGRGTF 579
            ...|:.         :|.:..|.|...|  ||         :....|...|.|..:   ||.|:|
Zfish   379 FNKNVV---------MADVLDAHVNVDR--PGSATVQRSAMLKESQFFQHYELCLQGSPLGEGSF 432

  Fly   580 SVCRLCEHRASKKHYAVKVIEKAAVAAASTSTSADCWEEVEIMLRYGNHPNIVTLYSVYEDAGSA 644
            ||||.|.|:.|.:.||||::.:...|...        .|:..:.:..:|||||||:.||.|....
Zfish   433 SVCRKCRHKQSGQEYAVKIVSRRMEAMTQ--------REIAALRQCESHPNIVTLHEVYTDQYHT 489

  Fly   645 YLVMELLKGGELLDRILAVGQMCESEASAVLRTIASAVAYLHEHGVVHRDLKPSNMIYASMRQTP 709
            |||||:|:|||||:||.......|.|||.:::::.|||:|:||.|||||||||.|:::|. ....
Zfish   490 YLVMEMLRGGELLERIRKRKMFAEWEASQLMKSLVSAVSYMHEAGVVHRDLKPENVLFAD-ESDE 553

  Fly   710 ETLKLCDLGFAKQLRADNGL--LMTPCYTANFVAPEVLKRQGYDLACDIWSLGVLLYIMLSGRTP 772
            ..||:.|.|||:...|.:|.  |.|||:|..:.|||:....|||.|||:|||||:||.||||:.|
Zfish   554 SVLKVIDFGFARLFPAGSGSAPLQTPCFTLQYAAPELFHSSGYDQACDLWSLGVILYTMLSGQVP 618

  Fly   773 FAS-----TPNDSPDVILKRIGSGQIDFTSSRWALISVPAKELLRQMLHIVPENRPTAARILEHD 832
            |.|     |.:.:.| |:.:|..|........|..:|..||:|:|.:|.:.||.|...:.:.|:.
Zfish   619 FQSEKKVMTSSHAAD-IMHKIKEGDFSLDGEAWKGVSEEAKDLVRGLLTVDPERRLKLSALKENA 682

  Fly   833 WLREQFAGGVQLTEYAVAPGSQLSLGAQQQQQNHISMALRGAVDATFRAIAIPQAANVG------ 891
            ||:   .|||..:.....|....|.|.          .:|..|:||::|.      |.|      
Zfish   683 WLQ---GGGVMSSTPLCTPDVLESTGP----------TVRTYVNATYKAF------NRGKREGFF 728

  Fly   892 --PVELSMLAKRR 902
              .|:.:.|||||
Zfish   729 LKSVDNAPLAKRR 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S6kIINP_001259779.1 S_TKc 199..457 CDD:214567 143/267 (54%)
STKc_RSK_N 203..517 CDD:270734 161/325 (50%)
STKc_RSK_C 567..883 CDD:270993 128/325 (39%)
S_TKc 568..834 CDD:214567 115/275 (42%)
rps6ka4XP_005165672.1 STKc_MSK2_N 44..375 CDD:270765 167/332 (50%)
S_TKc 45..313 CDD:214567 143/267 (54%)
STKc_MSK2_C 414..724 CDD:271082 131/338 (39%)
S_TKc 418..684 CDD:214567 115/275 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0603
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1132245at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R469
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.850

Return to query results.
Submit another query.