DRSC/TRiP Functional Genomics Resources

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Protein Alignment S6kII and Pka-C2

DIOPT Version :10

Sequence 1:NP_523437.2 Gene:S6kII / 33139 FlyBaseID:FBgn0262866 Length:911 Species:Drosophila melanogaster
Sequence 2:NP_733397.2 Gene:Pka-C2 / 43644 FlyBaseID:FBgn0000274 Length:354 Species:Drosophila melanogaster


Alignment Length:320 Identity:114/320 - (35%)
Similarity:179/320 - (55%) Gaps:24/320 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 VLGEGSFGKVFLVRKIIGKDAGTLYAMKVLKKATL-KVKDRVRSTNERKILADVGHAFIVRLHYA 267
            |||.||||.|.|||:..||:   .||.|::.|..| ::|......||:.:|......|::.|..:
  Fly    50 VLGNGSFGTVMLVREKSGKN---YYAAKMMSKEDLVRLKQVAHVHNEKHVLNAARFPFLIYLVDS 111

  Fly   268 FQTPGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAMNHLHTLGIIYRDLKPENILL 332
            .:....|||||..:.||:||:...:...|.|:..:||.|::|||:.::|.:.::|||||||||||
  Fly   112 TKCFDYLYLILPLVNGGELFSYHRRVRKFNEKHARFYAAQVALALEYMHKMHLMYRDLKPENILL 176

  Fly   333 DEHGHIALTDFGLSKQPLDGSKTYSFCGTVEYMAPEIVNRKGHDFAADWWSFGVLMYEMLTGNLP 397
            |:.|:|.:||||.:|: :|| :|.:.|||.||:|||||..:.::.:.|||:||:|:||.:.|..|
  Fly   177 DQRGYIKITDFGFTKR-VDG-RTSTLCGTPEYLAPEIVQLRPYNKSVDWWAFGILVYEFVAGRSP 239

  Fly   398 FHGQTRQETM--NQILRSKLGMPENLSPEAQSLLRALFKRNPQNRLGAGAQGILDIKAHCFFATI 460
            |....|...:  ::|......||...:.:.:||:.:|.:.:...|||....|..|:|:|.:|..:
  Fly   240 FAIHNRDVILMYSKICICDYKMPSYFTSQLRSLVESLMQVDTSKRLGNSNDGSSDVKSHPWFQGV 304

  Fly   461 DWVRLERKQVRPPFIPAV------SRDDAFYFDVEYTSKSPRDSPGGPISASAHEIFRGF 514
            ||..:..::|..|:.|.:      |..:.|.|...|.|:..|..          |:|..|
  Fly   305 DWFGILNQEVTAPYQPTISGAEDLSNFENFEFKDRYKSRINRHP----------ELFANF 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S6kIINP_523437.2 STKc_RSK_N 203..517 CDD:270734 114/320 (36%)
STKc_RSK_C 567..883 CDD:270993
Pka-C2NP_733397.2 Protein Kinases, catalytic domain 43..334 CDD:473864 106/288 (37%)
Blue background indicates that the domain is not in the aligned region.

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