DRSC/TRiP Functional Genomics Resources

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Protein Alignment S6kII and Pkc98E

DIOPT Version :10

Sequence 1:NP_523437.2 Gene:S6kII / 33139 FlyBaseID:FBgn0262866 Length:911 Species:Drosophila melanogaster
Sequence 2:NP_524545.2 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster


Alignment Length:512 Identity:168/512 - (32%)
Similarity:246/512 - (48%) Gaps:89/512 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 QCSSSGLGLQLRQRMQITSSGC-----------SSLAVTPMEHTPTEDDESGGGNSGVTSSVTTV 88
            ||.:.|:.:..|.:..:.:: |           |||.::|.:..|                    
  Fly   281 QCETCGMNVHKRCQKNVANT-CGINTKQMAEILSSLGISPDKQQP-------------------- 324

  Fly    89 TSSQRRQQLQQVQQQSALQAALEQHHISPTADLDSARKRPTHRTLCPPPELMELSDSESQGGVE- 152
               :|.:.|.|       |...:.:..|..||.|.|..: :.|:.....:.:..|.:....|.. 
  Fly   325 ---RRSKYLNQ-------QGGEDNYGASLGADGDGAPGQ-SFRSCALSVDSLATSTTTMTSGYNS 378

  Fly   153 --------TGGRREGATGRSAPDLEDTEPLYETENEFELKEVIKEGHDKADPSQFELLRVLGEGS 209
                    ||....||||.:.|                         .|.....|..::|||:||
  Fly   379 SSCMSLAVTGSGGVGATGETRP-------------------------GKCSLLDFNFIKVLGKGS 418

  Fly   210 FGKVFLVRKIIGKDAGTLYAMKVLKKATLKVKDRVRST-NERKILA-DVGHAFIVRLHYAFQTPG 272
            ||||.|..|   |....:||:|||||..:...|.|..| .|::||| ...|.|:..||..||||.
  Fly   419 FGKVMLAEK---KGTDEIYAIKVLKKDAIIQDDDVDCTMTEKRILALAANHPFLTALHSCFQTPD 480

  Fly   273 KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAMNHLHTLGIIYRDLKPENILLDEHGH 337
            :|:.:::::.||||..::.|...|......||.||:.||:..|||.|:||||||.:|||||:.||
  Fly   481 RLFFVMEYVNGGDLMFQIQKARRFEASRAAFYAAEVTLALQFLHTHGVIYRDLKLDNILLDQEGH 545

  Fly   338 IALTDFGLSKQP-LDGSKTYSFCGTVEYMAPEIVNRKGHDFAADWWSFGVLMYEMLTGNLPFHGQ 401
            ..|.|||:.|:. ::|..|.:||||.:|:||||:..:.:..:.|||:.|||||||:.|..||...
  Fly   546 CKLADFGMCKEGIMNGMLTTTFCGTPDYIAPEILKEQEYGASVDWWALGVLMYEMMAGQPPFEAD 610

  Fly   402 TRQETMNQILRSKLGMPENLSPEAQSLLRALFKRNPQNRLG-AGAQGILDIKAHCFFATIDWVRL 465
            ...|..:.|:...:..|..||.||.|:|:....:||:.||| .|.:.  :|:.|.|||.:||..|
  Fly   611 NEDELFDSIMHDDVLYPVWLSREAVSILKGFLTKNPEQRLGCTGDEN--EIRKHPFFAKLDWKEL 673

  Fly   466 ERKQVRPPFIPAVSRD-DAFYFDVEYTSKSPRDSPGG--PISASAHEIFRGFSFVAP 519
            |::.::|||.|.:... ||..||.|:|.:.|..:|.|  .:.....:.|.|||||.|
  Fly   674 EKRNIKPPFRPKMKNPRDANNFDAEFTKEDPVLTPIGNEVVRCINQDEFAGFSFVNP 730

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S6kIINP_523437.2 STKc_RSK_N 203..517 CDD:270734 134/320 (42%)
STKc_RSK_C 567..883 CDD:270993
Pkc98ENP_524545.2 C2_PKC_epsilon 1..134 CDD:175981
C1_nPKC_epsilon-like_rpt1 171..230 CDD:410385
C1_nPKC_epsilon-like_rpt2 250..304 CDD:410388 5/23 (22%)
STKc_nPKC_epsilon 412..729 CDD:270743 135/321 (42%)
Blue background indicates that the domain is not in the aligned region.

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