DRSC/TRiP Functional Genomics Resources

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Protein Alignment S6kII and Rps6ka4

DIOPT Version :10

Sequence 1:NP_523437.2 Gene:S6kII / 33139 FlyBaseID:FBgn0262866 Length:911 Species:Drosophila melanogaster
Sequence 2:NP_001101987.2 Gene:Rps6ka4 / 361715 RGDID:1307277 Length:773 Species:Rattus norvegicus


Alignment Length:770 Identity:320/770 - (41%)
Similarity:431/770 - (55%) Gaps:98/770 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 EFELKEVIKEGH-DKADPSQFELLRVLGEGSFGKVFLVRKIIGKDAGTLYAMKVLKKATL--KVK 241
            |.::.|....|| :|.....|.||:|||.|::||||||||..|.|||.|||||||:||.|  :.|
  Rat    13 ELQITEANLTGHEEKVSVENFALLKVLGTGAYGKVFLVRKAGGHDAGKLYAMKVLRKAALVQRAK 77

  Fly   242 DRVRSTNERKILADVGHA-FIVRLHYAFQTPGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 305
            .:..:..||.:|..|..| |:|.|||||||..||:||||::.||::||.|.:...|.|.:|:.|.
  Rat    78 TQEHTRTERSVLELVRQAPFLVTLHYAFQTDAKLHLILDYVSGGEMFTHLYQRQYFKEAEVRVYG 142

  Fly   306 AELALAMNHLHTLGIIYRDLKPENILLDEHGHIALTDFGLSKQPL--DGSKTYSFCGTVEYMAPE 368
            .|:.||:.|||.|||||||||.||:|||..|||.||||||||:.|  :..:|:|||||:||||||
  Rat   143 GEIVLALEHLHKLGIIYRDLKLENVLLDSEGHIVLTDFGLSKEFLTEEKERTFSFCGTIEYMAPE 207

  Fly   369 IVNRK-GHDFAADWWSFGVLMYEMLTGNLPF--HGQ--TRQETMNQILRSKLGMPENLSPEAQSL 428
            |:..| ||..|.||||.|:|::|:|||..||  .|:  |:.|...:||:.....|..:.|.||.|
  Rat   208 IIRSKAGHGKAVDWWSLGILLFELLTGASPFTLEGERNTQAEVSRRILKCSPPFPPRIGPVAQDL 272

  Fly   429 LRALFKRNPQNRLGAGAQGILDIKAHCFFATIDWVRLERKQVRPPFIPAV-SRDDAFYFDVEYTS 492
            |:.|..::|:.|||||.||..::|:|.||..:|||.|..:::..||.|.: |..|...|..|:|.
  Rat   273 LQRLLCKDPKKRLGAGPQGAQEVKSHLFFQGLDWVALAARKIPAPFRPQIRSELDVGNFAEEFTR 337

  Fly   493 KSPRDSPGGPISASAHEIFRGFSFVAPVLLEGQCAGSNMCSTSASPLHS---IAPIPAAPVGAPR 554
            ..|..||.|........||:|:|||||.:|..               |:   :|.:.||| ||  
  Rat   338 LEPVYSPAGSPPPGDPRIFQGYSFVAPSILFD---------------HNNAVMADVLAAP-GA-- 384

  Fly   555 TLPGVLPGN-------------FHAEYNL-LQE--LGRGTFSVCRLCEHRASKKHYAVKVIEKAA 603
               |..||.             |..:|.| |:|  ||:|:|||||.|..|.|.:.:|||::    
  Rat   385 ---GYRPGRAAVARSAMMQDSPFFQQYELDLREPALGQGSFSVCRRCRQRQSGQEFAVKIL---- 442

  Fly   604 VAAASTSTSADCWEEVEIMLRYGNHPNIVTLYSVYEDAGSAYLVMELLKGGELLDRILAVGQMCE 668
                |.....:...||..:....:|||:|.|:.|..|....|||:|||:|||||:.|.......|
  Rat   443 ----SRRLEENTQREVAALRLCQSHPNVVNLHEVLHDQLHTYLVLELLRGGELLEHIRKKRLFSE 503

  Fly   669 SEASAVLRTIASAVAYLHEH-GVVHRDLKPSNMIYASMRQTP-ETLKLCDLGFAKQLRADN--GL 729
            ||||.:||::.|||:::||. |||||||||.|::||.  .|| ..:|:.|.|||: ||..:  |.
  Rat   504 SEASQILRSLVSAVSFMHEEAGVVHRDLKPENILYAD--DTPGAPVKIIDFGFAR-LRPQSPAGP 565

  Fly   730 LMTPCYTANFVAPEVLKRQGYDLACDIWSLGVLLYIMLSGRTPFASTPNDSPD----VILKRIGS 790
            :.|||:|..:.|||:|.:||||.:||:|||||:||:||||:.||.........    .|:.:|..
  Rat   566 MQTPCFTLQYAAPELLAQQGYDESCDLWSLGVILYMMLSGQVPFQGASGQGGQSQAAEIMCKIRE 630

  Fly   791 GQIDFTSSRWALISVPAKELLRQMLHIVPENRPTAARILEHDWLREQFAGGVQLTEYAVAPGSQL 855
            |:.......|..:|..||||:|.:|.:.|..|.....:....||::   |..:.:.....|....
  Rat   631 GRFSLDGEAWQGVSEEAKELVRGLLTVDPAKRLKLEGLRSSSWLQD---GSARSSPPLRTPDVLE 692

  Fly   856 SLGAQQQQQNHISMALRGAVDATFRAIAIPQAANVG--------PVELSMLAKRR 902
            |.|.          |:|..::|||.|.      |.|        .||.:.|||||
  Rat   693 SSGP----------AVRSGLNATFMAF------NRGKREGFFLKSVENAPLAKRR 731

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S6kIINP_523437.2 STKc_RSK_N 203..517 CDD:270734 161/324 (50%)
STKc_RSK_C 567..883 CDD:270993 126/326 (39%)
Rps6ka4NP_001101987.2 STKc_MSK2_N 32..364 CDD:270765 166/331 (50%)
Protein Kinases, catalytic domain 404..714 CDD:473864 129/339 (38%)

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