DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment S6kII and CG4839

DIOPT Version :10

Sequence 1:NP_523437.2 Gene:S6kII / 33139 FlyBaseID:FBgn0262866 Length:911 Species:Drosophila melanogaster
Sequence 2:NP_609349.1 Gene:CG4839 / 34348 FlyBaseID:FBgn0032187 Length:1003 Species:Drosophila melanogaster


Alignment Length:446 Identity:140/446 - (31%)
Similarity:218/446 - (48%) Gaps:63/446 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 VTSSVTTVTSSQRRQQLQQVQ---------QQSALQAALEQHHISPTADLDSARKRPTHRTLCPP 136
            :.....|:.....:||.|.|.         :|:.|.|.:.|..:...|               |.
  Fly   590 IRCGTVTIKKLDEQQQEQIVANRKRGDYFGEQALLNADVRQASVYADA---------------PG 639

  Fly   137 PELMELSDSES---------QGGVETGGRREGATGRSAPDLEDTEPLYETENEFELKEVIKEGHD 192
            .|::.| |.|:         |...:...:|...:|||:     |:.| |.:||:....:      
  Fly   640 TEVLML-DREAFISYLGTIKQLREKPSSQRNDTSGRSS-----TKSL-EFDNEYSQVAI------ 691

  Fly   193 KADPSQFELLRVLGEGSFGKVFLVRKIIGKDAGTLYAMKVLKKATLKVKDRVRST-NERKILADV 256
                |:.:.:..||.|:||:|.||  ...:.|   .|:|::||..:..:|::... ||:.::...
  Fly   692 ----SELKKIATLGCGAFGRVDLV--AYNQQA---LALKIIKKIEVVKQDQIEHVYNEKNVMIKC 747

  Fly   257 GHA-FIVRLHYAFQTPGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAMNHLHTLGI 320
            ..: |||:|:..::....:|.:::...|||::|.:||...|.|:..||....:..|.::||:...
  Fly   748 RQSPFIVQLYRTYRNDKYVYFLMEACMGGDVWTVMSKRQYFDEKTAKFIAGCVVEAFDYLHSHHF 812

  Fly   321 IYRDLKPENILLDEHGHIALTDFGLSKQPLDGSKTYSFCGTVEYMAPEIVNRKGHDFAADWWSFG 385
            |||||||||::|...|:..|.|||.:|......||.:|.||.||:||||:..:|||.|.|:|:.|
  Fly   813 IYRDLKPENLMLGTDGYCKLVDFGFAKFVRQNEKTNTFAGTPEYVAPEIILDRGHDRAVDYWALG 877

  Fly   386 VLMYEMLTGNLPFHGQTRQETMNQILR--SKLGMPENLSPEAQSLLRALFKRNPQNRLGAGAQGI 448
            :|:||:|.|..||.|..:.:...|||.  ..:.||..:...||.|:|.|.|:.|..|||...:||
  Fly   878 ILVYELLVGKTPFRGVNQIKIYQQILSGIDVIHMPSRIPKSAQHLVRHLCKQLPAERLGYQRKGI 942

  Fly   449 LDIKAHCFFATIDWVRLERKQVRPPF-IPAVSRDDAFYF---DVEYTSKSPRDSPG 500
            .|||.|.:|.::||.||:.||:..|. .|..|..|..||   .||...:.|.:..|
  Fly   943 ADIKRHSWFESLDWQRLKLKQLPSPIKRPLKSWTDLQYFGPSGVENDYEPPEELSG 998

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S6kIINP_523437.2 STKc_RSK_N 203..517 CDD:270734 114/306 (37%)
STKc_RSK_C 567..883 CDD:270993
CG4839NP_609349.1 CAP_ED 431..539 CDD:237999
CAP_ED 550..663 CDD:237999 16/88 (18%)
STKc_cGK 700..957 CDD:270724 99/261 (38%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.