DRSC/TRiP Functional Genomics Resources

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Protein Alignment S6kII and prkcda

DIOPT Version :10

Sequence 1:NP_523437.2 Gene:S6kII / 33139 FlyBaseID:FBgn0262866 Length:911 Species:Drosophila melanogaster
Sequence 2:NP_999873.1 Gene:prkcda / 334571 ZFINID:ZDB-GENE-030131-6503 Length:684 Species:Danio rerio


Alignment Length:434 Identity:150/434 - (34%)
Similarity:216/434 - (49%) Gaps:59/434 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 QSALQAALEQHHISPTADLDSARKRPTHRTLCPPPELMELSDSESQGGVETGGRREGATGRSAPD 167
            |..|..||.|      ....|:.|||.:.|             :..|..:...:..|      ||
Zfish   285 QKLLAEALTQ------VSTKSSTKRPDNNT-------------QDVGVYQDFNKSPG------PD 324

  Fly   168 LEDTEPLYETENEFELKEVIKEGHDKADPSQ-----------FELLRVLGEGSFGKVFLVRKIIG 221
            :.|..|...          |.||.....||:           |...:|||:||||||.|...   
Zfish   325 VTDGTPYGH----------IWEGSSPRPPSRITHQTRITAEHFIFHKVLGKGSFGKVLLAEL--- 376

  Fly   222 KDAGTLYAMKVLKKATLKVKDRVRSTN-ERKILADV-GHAFIVRLHYAFQTPGKLYLILDFLRGG 284
            |..|..:|:|.|||..:.:.|.|..|. |:::||.. .:.|:..|:..|||...|:.::::|.||
Zfish   377 KGTGEWFAVKALKKDVVLMDDDVECTMVEKRVLALAWDNPFLTHLYSTFQTKEHLFFVMEYLNGG 441

  Fly   285 DLFTRLSKEVMFTEEDVKFYLAELALAMNHLHTLGIIYRDLKPENILLDEHGHIALTDFGLSKQP 349
            ||...:.::..|......||.||:...:..||:.||||||||.:|::||..|||.:.|||:.|:.
Zfish   442 DLMFHIQEKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDGDGHIKIADFGMCKEN 506

  Fly   350 LDG-SKTYSFCGTVEYMAPEIVNRKGHDFAADWWSFGVLMYEMLTGNLPFHGQTRQETMNQILRS 413
            :.| ::..:||||.:|:||||:..:.:.|:.||||||||:||||.|..||||....|....|...
Zfish   507 VFGDNRATTFCGTPDYIAPEILLGQQYSFSVDWWSFGVLVYEMLIGQSPFHGDDEDELFESIRMD 571

  Fly   414 KLGMPENLSPEAQSLLRALFKRNPQNRLGAGAQGILDIKAHCFFATIDWVRLERKQVRPPFIPAV 478
            ....|..:..:.:.:|..||:|:|..|||.    :.:|:.|.||.|::|..||.::|.|||.|.|
Zfish   572 TPHYPRWILLDTRDMLERLFERDPSRRLGI----VGNIRGHSFFKTVNWAALEGREVDPPFKPKV 632

  Fly   479 -SRDDAFYFDVEYTSKSPRDS--PGGPISASAHEIFRGFSFVAP 519
             :.:|...||.|:.|:.||.|  ..|.|.:.....|.||||:.|
Zfish   633 KAPNDCSNFDREFLSEKPRLSHCEKGLIDSMDQCAFAGFSFINP 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S6kIINP_523437.2 STKc_RSK_N 203..517 CDD:270734 126/319 (39%)
STKc_RSK_C 567..883 CDD:270993
prkcdaNP_999873.1 C1_nPKC_theta-like_rpt1 153..213 CDD:410384
C1_nPKC_theta-like_rpt2 232..281 CDD:410387
STKc_nPKC_delta 361..676 CDD:173710 127/321 (40%)
Blue background indicates that the domain is not in the aligned region.

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