DRSC/TRiP Functional Genomics Resources

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Protein Alignment S6kII and Rps6ka5

DIOPT Version :10

Sequence 1:NP_523437.2 Gene:S6kII / 33139 FlyBaseID:FBgn0262866 Length:911 Species:Drosophila melanogaster
Sequence 2:NP_001382521.1 Gene:Rps6ka5 / 314384 RGDID:1308336 Length:798 Species:Rattus norvegicus


Alignment Length:804 Identity:322/804 - (40%)
Similarity:448/804 - (55%) Gaps:97/804 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 ESQGGVETGGRREGATGRSAPDLEDTEPLYETENEFELKEVIKEGH-DKADPSQFELLRVLGEGS 209
            |.:||...|....|.:|      :..|.|...::  ||:.....|| :|.....||||:|||.|:
  Rat     2 EGEGGGSGGAGTSGDSG------DGGEQLLTVKH--ELRTANLTGHAEKVGIENFELLKVLGTGA 58

  Fly   210 FGKVFLVRKIIGKDAGTLYAMKVLKKATL--KVKDRVRSTNERKILADVGHA-FIVRLHYAFQTP 271
            :|||||||||.|.|||.|||||||||||:  |.|....:..||::|..:..: |:|.|||||||.
  Rat    59 YGKVFLVRKISGHDAGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE 123

  Fly   272 GKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAMNHLHTLGIIYRDLKPENILLDEHG 336
            .||:||||::.||:|||.||:...|||.:|:.|:.|:.||:.|||.|||||||:|.||||||.:|
  Rat   124 TKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNG 188

  Fly   337 HIALTDFGLSKQPL--DGSKTYSFCGTVEYMAPEIV--NRKGHDFAADWWSFGVLMYEMLTGNLP 397
            |:.||||||||:.:  :..:.||||||:|||||:||  ...|||.|.||||.||||||:|||..|
  Rat   189 HVVLTDFGLSKEFVADEAERAYSFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 253

  Fly   398 F----HGQTRQETMNQILRSKLGMPENLSPEAQSLLRALFKRNPQNRLGAGAQGILDIKAHCFFA 458
            |    ...::.|...:||:|:...|:.:|..|:.||:.|..::|:.|||.|.:...:||.|.||.
  Rat   254 FTVDGEKNSQAEISRRILKSEPPYPQGMSSVAKDLLQRLLMKDPKKRLGCGPRDAEEIKEHLFFE 318

  Fly   459 TIDWVRLERKQVRPPFIPAVSRD--DAFYFDVEYTSKSPRDSPGGPISASAHEIFRGFSFVAPVL 521
            .|:|..|..|:|..||.|.: ||  |...|..|:|...|..||.. :..|:..:|:|:|||||.:
  Rat   319 KINWDDLAAKKVPAPFKPVI-RDELDVSNFAEEFTEMDPTYSPAA-LPQSSERLFQGYSFVAPSI 381

  Fly   522 LEGQCAGSNMCSTSASPLHSIAPIPAAPVGAPRTLPGVL---------PGNFHAEYNL-LQE--L 574
            |..:    |.........|         :|..|  |||.         ...|:..|:| |::  |
  Rat   382 LFKR----NAAVIDPLQFH---------MGVDR--PGVTNVARSAMMKDSPFYQHYDLDLKDKPL 431

  Fly   575 GRGTFSVCRLCEHRASKKHYAVKVIEKAAVAAASTSTSADCWEEVEIMLRYGNHPNIVTLYSVYE 639
            |.|:||:||.|.|:.:.:.:|||:|.|        ...|:..:|:..:.....|||:|.|:.|:.
  Rat   432 GEGSFSICRKCVHKKTNQAFAVKIISK--------RMEANTQKEITALKLCEGHPNVVKLHEVFH 488

  Fly   640 DAGSAYLVMELLKGGELLDRILAVGQMCESEASAVLRTIASAVAYLHEHGVVHRDLKPSNMIYAS 704
            |....:||||||.||||.:||.......|:|||.::|.:.|||:::|:.|||||||||.|:::..
  Rat   489 DQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTD 553

  Fly   705 MRQTPETLKLCDLGFAKQLRADNGLLMTPCYTANFVAPEVLKRQGYDLACDIWSLGVLLYIMLSG 769
            .....| :|:.|.|||:....||..|.|||:|.::.|||:|...|||.:||:|||||:||.||||
  Rat   554 ENDNLE-IKVIDFGFARLKPPDNQPLKTPCFTLHYAAPELLTHNGYDESCDLWSLGVILYTMLSG 617

  Fly   770 RTPFASTPND----SPDVILKRIGSGQIDFTSSRWALISVPAKELLRQMLHIVPENRPTAARILE 830
            :.||.|....    |...|:|:|..|...|....|..:|..||:|::.:|.:.|..|...:.:..
  Rat   618 QVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 682

  Fly   831 HDWLREQFAGGVQLTEYAVAPGSQLS---------LGAQQQQQNHISMALRGAVDATFRAIAIPQ 886
            ::||::               |||||         ||:.       ..|:...|.|||.|....:
  Rat   683 NEWLQD---------------GSQLSSNPLMTPDILGSS-------GAAVHTCVKATFHAFNKYK 725

  Fly   887 AAN--VGPVELSMLAKRRAKDRAN 908
            ...  :..|:.:.|||||...|.:
  Rat   726 REGFCLQNVDKAPLAKRRKMKRTS 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S6kIINP_523437.2 STKc_RSK_N 203..517 CDD:270734 163/326 (50%)
STKc_RSK_C 567..883 CDD:270993 122/331 (37%)
Rps6ka5NP_001382521.1 Protein Kinases, catalytic domain 47..379 CDD:473864 169/333 (51%)
STKc_MSK1_C 417..726 CDD:271081 123/339 (36%)

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