DRSC/TRiP Functional Genomics Resources

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Protein Alignment S6kII and Rps6kc1

DIOPT Version :9

Sequence 1:NP_001259779.1 Gene:S6kII / 33139 FlyBaseID:FBgn0262866 Length:911 Species:Drosophila melanogaster
Sequence 2:XP_006250521.1 Gene:Rps6kc1 / 289342 RGDID:1306578 Length:1045 Species:Rattus norvegicus


Alignment Length:617 Identity:145/617 - (23%)
Similarity:222/617 - (35%) Gaps:190/617 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPLADSQKDLRQQPQQQQQQQHVSS---TSSSNNAEQQCSSSGLGL---QLRQRMQITS------ 53
            :||..|.....|....|:.....||   ..|.:::|::|::..|.|   ..::::.:||      
  Rat   469 LPLKTSLTPSSQDDSNQEDDGQDSSPKWPDSGSSSEEECTAGYLTLCNEYGQEKLDLTSLNEESV 533

  Fly    54 -----SGCSSLAVTPMEHTPTEDDESGG-------GNSGVTSSVTTVTSSQRRQQLQQVQQQSAL 106
                 ....|.||.....:.|.|..|..       |:.|:.:..:..||...|:......:...:
  Rat   534 MQPEGENADSQAVRSFPASLTADSASPSTQLKFFPGDEGLEAVCSPRTSDSLRRSKNSPMEFFRI 598

  Fly   107 QAALEQHHISPTADLDSARKRPTHRTLCPPP--ELMELSD----------------SESQGGVET 153
            .:   :...|....|||..|.   .:|.|.|  .|..|.|                ||:|..:..
  Rat   599 DS---KDSTSELLGLDSGEKL---HSLKPEPLKALFTLEDGDSPSQSFDAGKSQGESEAQDSISR 657

  Fly   154 GGR--------REGAT--------GRSAPDL-----EDTEPLYETE------------NEFELKE 185
            |..        :|.|:        ||  |||     .:.:|..||.            ...|..:
  Rat   658 GSDDSVPVISFKEAASEDVCSAEEGR--PDLLVNLPGELQPTKETSAVDPTKFSQASIGRLEAPD 720

  Fly   186 VI-------------KEGHDK-ADPSQFELLRVLGEGSFGKVFLVRKIIGKDAGTLYAMKV---- 232
            |:             :||.:: :.|::|....|..|.|          ...|.|.|:...|    
  Rat   721 VLCLRLSSEQCHDLGQEGPEELSHPTEFRPGGVTPERS----------AQADLGVLFTATVDHSS 775

  Fly   233 ----------------------------LKKATLKVKDRVRSTNERKILADVGHAFIVRLHYAFQ 269
                                        |:::...:........|.....|...:..|.|   |.
  Rat   776 SQDQFLFSSLHSESDRLGQVEGAVTSQDLQESLFHIASPCSGAKEDSAHTDTATSEEVLL---FT 837

  Fly   270 TPGK-------------------LYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYLAELALAMN 313
            .|.|                   ::.|.:     ||..||  |..:...|..::.:.||:.:|::
  Rat   838 EPSKEGDSEAKVRSVGAGGAEKEVHQIFE-----DLDQRLAVSARLFIPEGCIQRWAAEMVVALD 897

  Fly   314 HLHTLGIIYRDLKPENILLDEHGHIALTDFGLSKQPLDGSKTYSFCGTVE----YMAPEIVNRKG 374
            .||..||:.|||.|.||||::.|||.||.|.      ..|:....|.:..    |.|||:.....
  Rat   898 ALHREGIVCRDLNPNNILLNDGGHIQLTYFS------RWSEVEDLCDSDAIARMYCAPEVGAVTE 956

  Fly   375 HDFAADWWSFGVLMYEMLTGN--LPFH--GQTRQETMNQILRSKLGMPENLSPEAQSLLRALFKR 435
            ...|.||||.|.:::|:|||.  :..|  |.....|:|        ||:.:|.||:||::.|.:.
  Rat   957 ETEACDWWSLGAVLFELLTGKTLVECHPAGINTHTTLN--------MPDCVSEEARSLIQQLLQF 1013

  Fly   436 NPQNRLGAGAQGILDIKAHCFFATIDWVRLER 467
            ||..|||||..|:.|||:|.||..:||..|.|
  Rat  1014 NPMERLGAGVAGVEDIKSHPFFTPVDWAELTR 1045

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S6kIINP_001259779.1 S_TKc 199..457 CDD:214567 84/318 (26%)
STKc_RSK_N 203..517 CDD:270734 89/326 (27%)
STKc_RSK_C 567..883 CDD:270993
S_TKc 568..834 CDD:214567
Rps6kc1XP_006250521.1 PX_RPK118_like 11..128 CDD:132820
MIT_SNX15 237..305 CDD:239140
PKc_like 334..>420 CDD:304357
STKc_RPK118_like <858..1035 CDD:270728 68/195 (35%)
S_TKc <867..1035 CDD:214567 67/181 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0603
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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