DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment S6kII and gad8

DIOPT Version :10

Sequence 1:NP_523437.2 Gene:S6kII / 33139 FlyBaseID:FBgn0262866 Length:911 Species:Drosophila melanogaster
Sequence 2:NP_588010.1 Gene:gad8 / 2539206 PomBaseID:SPCC24B10.07 Length:569 Species:Schizosaccharomyces pombe


Alignment Length:560 Identity:190/560 - (33%)
Similarity:286/560 - (51%) Gaps:69/560 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VSSTSSSNNAEQQCSSSGLGLQLRQR-------MQITSSGCSSLAVTPMEHTPTE-----DD--- 72
            :|||||..:::::...|....:..|.       :|:|.....:|.: |..|.|..     |:   
pombe    36 LSSTSSRKSSDEKSRKSSEDKRSPQSTVVQPGLLQVTIIEARNLKL-PSGHVPANYGVSIDNSLL 99

  Fly    73 ----ESGGGNSGVTSSVTTVTSSQRRQQLQQVQQQSALQAALEQHHISPTADLDSARKRPTHRTL 133
                .:|.|::...|....:..........::...:...|:||.......|..|.:|.......:
pombe   100 APPLSNGSGHARSRSHAWWLPYIVVEFDKNEILVDALNTASLENPCWDYQATFDVSRYSKLSLNI 164

  Fly   134 CPPPELMELSDSESQGGVETGGRREGATGRSAPDL------EDTEPLYETENEFELKEVIKEGHD 192
                 .:..|.|.|:.|:.......|.  :.:|..      ::..||:....|..::.:.|    
pombe   165 -----YLRSSSSRSRNGMGNDAFLGGI--KLSPSFIVNKLTDEWVPLHGGSGELRVQMLYK---- 218

  Fly   193 KADPSQ--------FELLRVLGEGSFGKVFLVRKIIGKDAGTLYAMKVLKKATLKVKDRVRST-N 248
               |:|        ||||:|:|:||||||..|||   :|...:||:|.:|||.:..:..|..| .
pombe   219 ---PNQSTPLTIDAFELLKVVGKGSFGKVMQVRK---RDTSRIYALKTMKKAHIVSRSEVDHTLA 277

  Fly   249 ERKILADVGHAFIVRLHYAFQTPGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAMN 313
            ||.:||.|.:.|||.|.::||:||||||:|.|:.||:||..|.:|..|.....|||:|||.:|:.
pombe   278 ERTVLAQVNNPFIVPLKFSFQSPGKLYLVLAFVNGGELFHHLQREGCFDTYRAKFYIAELLVALE 342

  Fly   314 HLHTLGIIYRDLKPENILLDEHGHIALTDFGLSKQPL-DGSKTYSFCGTVEYMAPEIVNRKGHDF 377
            .||...:|||||||||||||..|||||.||||.|..: ...:|.:||||.||:|||::...|:..
pombe   343 CLHEFNVIYRDLKPENILLDYTGHIALCDFGLCKLNMAKTDRTNTFCGTPEYLAPELLLGHGYTK 407

  Fly   378 AADWWSFGVLMYEMLTGNLPFHGQTRQETMNQILRSKLGMPENLSPEAQSLLRALFKRNPQNRLG 442
            ..|||:.|||:|||:||..||:.:...|...:||:..|..|:|:..:|:.||..|..|.|:.|||
pombe   408 VVDWWTLGVLLYEMITGLPPFYDENINEMYRKILQDPLRFPDNIDEKAKDLLSGLLTRAPEKRLG 472

  Fly   443 AGAQGILDIKAHCFFATIDWVRLERKQVRPPFIPAV-SRDDAFYFDVEYTSKSPRDS--PGGPIS 504
            :|  |..:||.|.||..|||.:|..|:::|||.|:| |..|...||.|:||:.|.||  ....:|
pombe   473 SG--GAQEIKNHPFFDDIDWKKLCAKKIQPPFKPSVESAIDTSNFDSEFTSEIPMDSVVADSHLS 535

  Fly   505 ASAHEIFRGFSFVAPVLLEGQCAGSNMCSTSASPLHSIAP 544
            .:..:.|..:|:..|..::           ::..:::|||
pombe   536 ETVQQRFANWSYQRPTTID-----------TSDDINTIAP 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S6kIINP_523437.2 STKc_RSK_N 203..517 CDD:270734 147/318 (46%)
STKc_RSK_C 567..883 CDD:270993
gad8NP_588010.1 YPK1_N_like 66..225 CDD:212165 28/173 (16%)
STKc_YPK1_like 235..547 CDD:270737 146/316 (46%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.