DRSC/TRiP Functional Genomics Resources

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Protein Alignment S6kII and Prkch

DIOPT Version :10

Sequence 1:NP_523437.2 Gene:S6kII / 33139 FlyBaseID:FBgn0262866 Length:911 Species:Drosophila melanogaster
Sequence 2:NP_032882.2 Gene:Prkch / 18755 MGIID:97600 Length:683 Species:Mus musculus


Alignment Length:426 Identity:155/426 - (36%)
Similarity:219/426 - (51%) Gaps:69/426 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 LEQHHISPTADLDSARKRPTHRTLCPPPELMELSDSESQGGVETGGRREGATGRSAPDLEDTEPL 174
            |:..:||||:.|.|      ..||                      ||:|               
Mouse   311 LQPGNISPTSKLIS------RSTL----------------------RRQG--------------- 332

  Fly   175 YETENEFELKEVIKEGH-------DKADPSQFELLRVLGEGSFGKVFLVRKIIGKDAGTLYAMKV 232
                     ||..|||:       .:.....||.:||||:||||||.|.|.   |:.|.|||:||
Mouse   333 ---------KEGSKEGNGIGVNSSSRFGIDNFEFIRVLGKGSFGKVMLARI---KETGELYAVKV 385

  Fly   233 LKKATLKVKDRVRST-NERKILADV-GHAFIVRLHYAFQTPGKLYLILDFLRGGDLFTRLSKEVM 295
            |||..:...|.|..| .|::||:.. .|.|:.:|...||||.:|:.:::|:.||||...:.|...
Mouse   386 LKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR 450

  Fly   296 FTEEDVKFYLAELALAMNHLHTLGIIYRDLKPENILLDEHGHIALTDFGLSKQPL-DGSKTYSFC 359
            |.|...:||.||:..|:..||..||||||||.:|:|||..||..|.|||:.|:.: :|..|.:||
Mouse   451 FDEARARFYAAEIISALMFLHEKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFC 515

  Fly   360 GTVEYMAPEIVNRKGHDFAADWWSFGVLMYEMLTGNLPFHGQTRQETMNQILRSKLGMPENLSPE 424
            ||.:|:||||:....:..|.|||:.|||:||||.|:.||..:...:....||..::..|..|..:
Mouse   516 GTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHED 580

  Fly   425 AQSLLRALFKRNPQNRLGAGAQ-GILDIKAHCFFATIDWVRLERKQVRPPFIPAV-SRDDAFYFD 487
            |..:|::...:||..|||:..| |..:|..|.||..|||.:|..:|:.|||.|.: ||:|...||
Mouse   581 ATGILKSFMTKNPTMRLGSLTQGGEHEILRHPFFKEIDWAQLNHRQLEPPFRPRIKSREDVSNFD 645

  Fly   488 VEYTSKSPRDSP--GGPISASAHEIFRGFSFVAPVL 521
            .::..:.|..:|  .|.:.....:.||.||:|:|.|
Mouse   646 PDFIKEEPVLTPIDEGHLPMINQDEFRNFSYVSPEL 681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S6kIINP_523437.2 STKc_RSK_N 203..517 CDD:270734 133/320 (42%)
STKc_RSK_C 567..883 CDD:270993
PrkchNP_032882.2 C2_PKC_epsilon 8..140 CDD:175981
C1_nPKC_epsilon-like_rpt1 166..226 CDD:410385
C1_nPKC_epsilon-like_rpt2 244..298 CDD:410388
STKc_nPKC_eta 359..681 CDD:270742 135/324 (42%)
Blue background indicates that the domain is not in the aligned region.

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