DRSC/TRiP Functional Genomics Resources

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Protein Alignment S6kII and rsks-1

DIOPT Version :9

Sequence 1:NP_001259779.1 Gene:S6kII / 33139 FlyBaseID:FBgn0262866 Length:911 Species:Drosophila melanogaster
Sequence 2:NP_499447.2 Gene:rsks-1 / 176554 WormBaseID:WBGene00012929 Length:550 Species:Caenorhabditis elegans


Alignment Length:444 Identity:196/444 - (44%)
Similarity:266/444 - (59%) Gaps:23/444 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 SARKRPTHRTLCPPPELMELSDSESQGGVETGGRREGATGRSAPDLEDTEPLYETENEFEL-KEV 186
            |.::...|...|  .|:||  |......|..|  :..|...|:..:||  |:.|:   .:| ...
 Worm    17 SPQRHAYHYDNC--TEIME--DDHMYSNVADG--QISAPPPSSSYMED--PMMES---IQLCASA 70

  Fly   187 IKEGHDKADPSQFELLRVLGEGSFGKVFLVRKIIGKDAGTLYAMKVLKKATL--KVKDRVRSTNE 249
            |...:.:..|..|:||:|||:|.:||||.|||..|.|.|.::|||||:|||:  ..||...:..|
 Worm    71 INPPNVRVGPEDFQLLKVLGKGGYGKVFQVRKTTGSDNGQIFAMKVLQKATIVRNQKDTAHTKAE 135

  Fly   250 RKILADVGHAFIVRLHYAFQTPGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAMNH 314
            |.||..|...||..|.|||||.|||||||::|.||:||..|.:|.||.|...||||:|:.:::.|
 Worm   136 RNILEAVKSPFICDLLYAFQTGGKLYLILEYLSGGELFMHLEREGMFMENVAKFYLSEIVVSLEH 200

  Fly   315 LHTLGIIYRDLKPENILLDEHGHIALTDFGLSKQPLDG-SKTYSFCGTVEYMAPEIVNRKGHDFA 378
            ||..|||||||||||||||.:||:.||||||.|:.::| .||::||||:|||||||:.|.||..|
 Worm   201 LHQQGIIYRDLKPENILLDAYGHVKLTDFGLCKEEIEGDQKTHTFCGTIEYMAPEILMRCGHGKA 265

  Fly   379 ADWWSFGVLMYEMLTGNLPFHGQTRQETMNQILRSKLGMPENLSPEAQSLLRALFKRNPQNRLGA 443
            .||||.|.||::||||..||..:.|::|:::||:.:|.:|..||.||:.|::.|.||:...||||
 Worm   266 VDWWSLGALMFDMLTGGPPFTAENRRKTIDKILKGRLTLPAYLSNEARDLIKKLLKRHVDTRLGA 330

  Fly   444 GAQGILDIKAHCFFATIDWVRLERKQVRPPFIPAVSRD-DAFYFDVEYTSKSPRDSP-GGPISAS 506
            |.....:||:|.||.|.||..:..:|:..||.|.:..| |...||..:|..:|.||| ....|.:
 Worm   331 GLSDAEEIKSHAFFKTTDWNLVYARQLEAPFKPNIENDEDTSLFDARFTKMTPVDSPCETNFSLN 395

  Fly   507 AHEIFRGFSFVAPVLLE----GQCAGSNMCSTSASPLHS-IAPIPAAPVGAPRT 555
            ....|.||::|||.:||    |...|.::...::|...: .|..|..| |.|.|
 Worm   396 GDNPFVGFTYVAPSVLEMMNKGGHGGISVAHLASSMSRAGAAKSPRKP-GDPET 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S6kIINP_001259779.1 S_TKc 199..457 CDD:214567 142/260 (55%)
STKc_RSK_N 203..517 CDD:270734 161/318 (51%)
STKc_RSK_C 567..883 CDD:270993
S_TKc 568..834 CDD:214567
rsks-1NP_499447.2 S_TKc 83..344 CDD:214567 142/260 (55%)
STKc_p70S6K 86..408 CDD:270736 163/321 (51%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1132245at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R469
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.950

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