DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment S6kII and rsks-1

DIOPT Version :10

Sequence 1:NP_523437.2 Gene:S6kII / 33139 FlyBaseID:FBgn0262866 Length:911 Species:Drosophila melanogaster
Sequence 2:NP_499447.2 Gene:rsks-1 / 176554 WormBaseID:WBGene00012929 Length:550 Species:Caenorhabditis elegans


Alignment Length:444 Identity:196/444 - (44%)
Similarity:266/444 - (59%) Gaps:23/444 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 SARKRPTHRTLCPPPELMELSDSESQGGVETGGRREGATGRSAPDLEDTEPLYETENEFEL-KEV 186
            |.::...|...|  .|:||  |......|..|  :..|...|:..:||  |:.|:   .:| ...
 Worm    17 SPQRHAYHYDNC--TEIME--DDHMYSNVADG--QISAPPPSSSYMED--PMMES---IQLCASA 70

  Fly   187 IKEGHDKADPSQFELLRVLGEGSFGKVFLVRKIIGKDAGTLYAMKVLKKATL--KVKDRVRSTNE 249
            |...:.:..|..|:||:|||:|.:||||.|||..|.|.|.::|||||:|||:  ..||...:..|
 Worm    71 INPPNVRVGPEDFQLLKVLGKGGYGKVFQVRKTTGSDNGQIFAMKVLQKATIVRNQKDTAHTKAE 135

  Fly   250 RKILADVGHAFIVRLHYAFQTPGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAMNH 314
            |.||..|...||..|.|||||.|||||||::|.||:||..|.:|.||.|...||||:|:.:::.|
 Worm   136 RNILEAVKSPFICDLLYAFQTGGKLYLILEYLSGGELFMHLEREGMFMENVAKFYLSEIVVSLEH 200

  Fly   315 LHTLGIIYRDLKPENILLDEHGHIALTDFGLSKQPLDG-SKTYSFCGTVEYMAPEIVNRKGHDFA 378
            ||..|||||||||||||||.:||:.||||||.|:.::| .||::||||:|||||||:.|.||..|
 Worm   201 LHQQGIIYRDLKPENILLDAYGHVKLTDFGLCKEEIEGDQKTHTFCGTIEYMAPEILMRCGHGKA 265

  Fly   379 ADWWSFGVLMYEMLTGNLPFHGQTRQETMNQILRSKLGMPENLSPEAQSLLRALFKRNPQNRLGA 443
            .||||.|.||::||||..||..:.|::|:::||:.:|.:|..||.||:.|::.|.||:...||||
 Worm   266 VDWWSLGALMFDMLTGGPPFTAENRRKTIDKILKGRLTLPAYLSNEARDLIKKLLKRHVDTRLGA 330

  Fly   444 GAQGILDIKAHCFFATIDWVRLERKQVRPPFIPAVSRD-DAFYFDVEYTSKSPRDSP-GGPISAS 506
            |.....:||:|.||.|.||..:..:|:..||.|.:..| |...||..:|..:|.||| ....|.:
 Worm   331 GLSDAEEIKSHAFFKTTDWNLVYARQLEAPFKPNIENDEDTSLFDARFTKMTPVDSPCETNFSLN 395

  Fly   507 AHEIFRGFSFVAPVLLE----GQCAGSNMCSTSASPLHS-IAPIPAAPVGAPRT 555
            ....|.||::|||.:||    |...|.::...::|...: .|..|..| |.|.|
 Worm   396 GDNPFVGFTYVAPSVLEMMNKGGHGGISVAHLASSMSRAGAAKSPRKP-GDPET 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S6kIINP_523437.2 STKc_RSK_N 203..517 CDD:270734 161/318 (51%)
STKc_RSK_C 567..883 CDD:270993
rsks-1NP_499447.2 STKc_p70S6K 86..408 CDD:270736 163/321 (51%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.