DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp2 and UBP5

DIOPT Version :9

Sequence 1:NP_001285528.1 Gene:Usp2 / 33132 FlyBaseID:FBgn0031187 Length:950 Species:Drosophila melanogaster
Sequence 2:NP_011071.3 Gene:UBP5 / 856887 SGDID:S000000946 Length:805 Species:Saccharomyces cerevisiae


Alignment Length:731 Identity:188/731 - (25%)
Similarity:290/731 - (39%) Gaps:183/731 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   286 PSSSKSASHRYPRPKSTIIASAHSN--FAASFEKFSG-GLYRQTNGETNIESKTSSNARRYGIDS 347
            |:|.|.:.........::|.|.||:  |.::.:||.. .||..|....|.:.:.:          
Yeast   189 PASFKDSFTDQQIESVSLITSPHSDITFFSNRDKFKFIILYTDTQLHNNFQQRQT---------- 243

  Fly   348 LSIKASIEKFNNLSGQKRQNPGSGSGIGPGSATASGLGGGRLSVASRSNHGSQAGGSSSNLQQRY 412
             .|.|.|...|::             |.|       |.|.::.:                |:..:
Yeast   244 -RILAKILSQNSV-------------IKP-------LSGTKILI----------------LENGF 271

  Fly   413 SSDLDNIRVAAGYSSSLTRAAYRTTATMNSVSTPVAVTSELGGPISGDGGETATAMGQPTSKVTV 477
            |   :.:::...|.||::..|:.|    :|.|||.     .|.|            ..||.....
Yeast   272 S---NWVKLGGAYQSSVSETAHLT----SSSSTPA-----FGSP------------QVPTGLFNQ 312

  Fly   478 RGAHSNRQPIECDSVVLTNKASKDATTAATPTVATATATHTPATSSVSTVTVTAAAPNSASDSVS 542
            :....|:           :|:....:....|.:.|......|...|...: :...:||..|.:|.
Yeast   313 KSLSPNK-----------DKSMPMVSMNTQPLLTTVQRPQLPLYYSDLPI-IPQPSPNRNSPTVQ 365

  Fly   543 RSLARSPISSTLARSGTGS-----------------SSTARSVLPP----MTPTSSRYWDRDSGT 586
            :.....|  :||::..|.|                 ::.|.:.|||    .:|.......::..:
Yeast   366 KFSPHPP--TTLSKLNTPSTIQNKANTVERISPDIRAAQAHAYLPPASNVFSPRIPPLPQQNLSS 428

  Fly   587 SRSSIGTSSALNSSSLKHNSDDGYKTASSSRDEKSEGLCGLRNIGNTCFMNSVIQCLSHTQELTR 651
            ||.:|..:|.:....|                     :.||.||||.|:||.::|||..|.:|.|
Yeast   429 SRQTILNNSQVLDLDL---------------------IVGLENIGNCCYMNCILQCLVGTHDLVR 472

  Fly   652 -FL----------RSHHGSRSLSTKDQQILHEFAKLIQEM------WTANVHT--VTPMELKRAF 697
             ||          .|..||:.|..|:      ||.|:..|      ...||.|  |..::.|:..
Yeast   473 MFLDNTYLNFINFDSSRGSKGLLAKN------FAILVNNMHRHGAFTPPNVRTIPVQTIQFKKIC 531

  Fly   698 STKHRMYSDYNQQDAQEFLRFFLDSLHSALN-SGVKGETLNIDD-------NLSDNKKADLTWEW 754
            ...:.||||..|||.|||.:|.||.||..|| :|.|.....:.|       .:|..|.:.|.||.
Yeast   532 GHINPMYSDSMQQDCQEFCQFLLDGLHEDLNQNGSKKHLKQLSDEEERMREKMSIRKASALEWER 596

  Fly   755 YTRHENSLVRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEVLD 819
            :...:.|.:.|||.||..|.|:|..|.:||.|:..|..||||:|....|.:..|...|.:.|.|.
Yeast   597 FLLTDFSAIIDLFQGQYASRLQCQVCEHTSTTYQTFSVLSVPVPRVKTCNILDCFREFTKCERLG 661

  Fly   820 GDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRWSKLSNIVEFPTSDSELNMGSYGAN 884
            .||..:|.||..::..||...|.|.||.|:|:|||| :.:.:|.:..|::|.|   |::..|.|.
Yeast   662 VDEQWSCPKCLKKQPSTKQLKITRLPKKLIINLKRF-DNQMNKNNVFVQYPYS---LDLTPYWAR 722

  Fly   885 S-------NSNV---------HYSLYAISNHMGSTAGGHYVALCKHPVSRKWHEFNDNIVSDALS 933
            .       |.::         .|.||.::.|.||..||||.:.......:.|:.|:|::......
Yeast   723 DFNHEAIVNEDIPTRGQVPPFRYRLYGVACHSGSLYGGHYTSYVYKGPKKGWYFFDDSLYRPITF 787

  Fly   934 ENHLVSSSAYILFYER 949
            ....::.|||:|||||
Yeast   788 STEFITPSAYVLFYER 803

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp2NP_001285528.1 UCH 624..947 CDD:278850 122/365 (33%)
Peptidase_C19R 626..948 CDD:239139 123/364 (34%)
UBP5NP_011071.3 RHOD 159..280 CDD:197731 24/140 (17%)
COG5533 359..805 CDD:227820 143/478 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1868
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000821
OrthoInspector 1 1.000 - - mtm9239
orthoMCL 1 0.900 - - OOG6_101021
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1591
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.700

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