DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp2 and UBP11

DIOPT Version :9

Sequence 1:NP_001285528.1 Gene:Usp2 / 33132 FlyBaseID:FBgn0031187 Length:950 Species:Drosophila melanogaster
Sequence 2:NP_174562.2 Gene:UBP11 / 840179 AraportID:AT1G32850 Length:892 Species:Arabidopsis thaliana


Alignment Length:774 Identity:172/774 - (22%)
Similarity:260/774 - (33%) Gaps:311/774 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   469 GQPT-SKVTVRGAHSNRQPIECDSVVLTNKASKDATTAATPTVATATATHTPATSSVSTVTVTAA 532
            |.|. .|:..:|.::....:|...:.||...|:|.:|         |.......:|:..:.....
plant   124 GPPVPRKLISQGFYTKSFSVEVYLLCLTLTDSRDEST---------TIIRLSKQASIGQLYEMVC 179

  Fly   533 APNSASDSVSR---------SLARSPISS--------------TLARSGTGSSSTARSV------ 568
            |....:...:|         |:...|.|.              .|...|:.||....|:      
plant   180 AGKGVAKEKARIWDYFEKKKSVLLDPSSEQSVEEAGLQFNQDILLEVDGSASSQFVMSLAENELA 244

  Fly   569 LPPMTPTSSRYWDRDSGTSRSSIGTSSALNSSSLKHNS-DDGYKTASSSRDEKSEGLCGLRNIGN 632
            :.|:.|..|...|...|....|.|.|:....|....|: .|...:.:..:.|| .||.||:|:||
plant   245 MVPLEPMRSDAMDIVRGGGTLSNGHSNGFKFSFFGRNTFKDDVSSRTFGKGEK-RGLGGLQNLGN 308

  Fly   633 TCFMNSVIQCLSHTQELTRFLRSHHGSRSLSTKDQ-----QILHEFAKLIQEMWTANVHTVTPME 692
            ||||||.:|||:||..:..:....:.| .::.|:.     ::...|.:|::::|::..:||.|  
plant   309 TCFMNSTLQCLAHTPPIVEYFLQDYRS-DINAKNPLGMRGELAIAFGELLRKLWSSGQNTVAP-- 370

  Fly   693 LKRAFSTK----HRMYSDYNQQDAQEFLRFFLDSLHSALNSGVKGETLNI--DDNLSDNKKADLT 751
              |||.||    ...:|.|||.|:||.|.|.||.||..||...:...:..  .|...|::.|:..
plant   371 --RAFKTKLARFAPQFSGYNQHDSQEMLAFLLDGLHEDLNKVKRKPYIEAKDSDGRPDDEVAEEK 433

  Fly   752 WEWYTRHENSLVRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLSVPLPSS---------------- 800
            |:::....:|::.|:|.||.||||.|..||..|:|||||..||:|||||                
plant   434 WKYHKARNDSVIVDVFQGQYKSTLVCPDCGKISITFDPFMYLSLPLPSSRTRSMTVTVFYGDGSH 498

  Fly   801 ----------------------------------------------------------------- 800
                                                                             
plant   499 LPMPYTVTVPKDGSCRDLSNALGTACCLDNDESLLLAEVYDHKVFKYYENPRELLNGIKDNEHIV 563

  Fly   801 -----------SRCKLE------------------------------------------------ 806
                       .:.|||                                                
plant   564 AYRFKQMHKGPGKVKLEILHGEQEKSSDRGPKCFGTPLVTYINKEPLSGTDIATSISGLLSPLRR 628

  Fly   807 ----------------------------------------------------------------- 806
                                                                             
plant   629 VHMSCVVNSGNENGHVPDESSRSILSRDTETEDNDRELSLSLLRDYYSFNLQPLESDSVVNPGSV 693

  Fly   807 -------------------------------------------ACLDLFIREEVLDGDEMPTCAK 828
                                                       :||:.|:.||.|..|:|..|..
plant   694 TKVLVKWNEKEHEKYDSSYLNDLPKVHKNVLAKKTMQEGISLFSCLEAFLAEEPLGPDDMWYCPG 758

  Fly   829 CKTRRKCTKSFTIQRFPKYLVIHLKRFSETRW--SKLSNIVEFPTSDSELNMGSYGANSNSNVH- 890
            ||..|:..|...:.:.|..||.|||||:.:|:  :|:..:|.|...|  |::..|..|.:...: 
plant   759 CKEHRQANKKLDLWKLPDILVFHLKRFTYSRYFKNKIDTLVNFHIHD--LDLSKYVKNEDGQSYL 821

  Fly   891 YSLYAISNHMGSTAGGHYVALCKHPVSRKWHEFNDNIVSDALSENHLVSSSAYILFYER 949
            |.|||||||.|...||||.|..|.....||:.|:|:.|| |::|:.:.:|:||:|||:|
plant   822 YELYAISNHYGGLGGGHYTAYAKLMDETKWYNFDDSRVS-AVNESEIKTSAAYVLFYQR 879

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp2NP_001285528.1 UCH 624..947 CDD:278850 133/584 (23%)
Peptidase_C19R 626..948 CDD:239139 133/583 (23%)
UBP11NP_174562.2 UBP12 20..879 CDD:227847 171/772 (22%)
DUSP 37..135 CDD:197831 3/10 (30%)
Peptidase_C19 302..>477 CDD:271592 67/179 (37%)
Peptidase_C19R <722..878 CDD:239139 57/158 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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