DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp2 and USP11

DIOPT Version :9

Sequence 1:NP_001285528.1 Gene:Usp2 / 33132 FlyBaseID:FBgn0031187 Length:950 Species:Drosophila melanogaster
Sequence 2:NP_001358001.1 Gene:USP11 / 8237 HGNCID:12609 Length:920 Species:Homo sapiens


Alignment Length:723 Identity:152/723 - (21%)
Similarity:222/723 - (30%) Gaps:327/723 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   551 SSTLARSGTGS------SSTARSVLPPMTPTSSRYWDRDSGTSRSSIGTS------SALNSSSL- 602
            |.|:..|.|.|      ::..|.::.|...|  |.|.::|..|...:..:      :||.:..| 
Human   167 SHTVQFSHTDSIGLVLRTARERFLVEPQEDT--RLWAKNSEGSLDRLYDTHITVLDAALETGQLI 229

  Fly   603 ---KHNSDDGYKTAS--------SSRDEK---SEGLCGLRNIGNTCFMNSVIQCLSHTQELTRFL 653
               ....|..:.:|.        |..||.   ..|:|||.|:||||||||.:||||:..:||.:.
Human   230 IMETRKKDGTWPSAQLHVMNNNMSEEDEDFKGQPGICGLTNLGNTCFMNSALQCLSNVPQLTEYF 294

  Fly   654 RSHHGSRSLSTKDQ-----QILHEFAKLIQEMWTANVHTVTPMELKRAFSTKHRMYSDYNQQDAQ 713
            .::.....|:.::.     :|...:|.|:::.|:.:..::.|...|.........:..|.|.|:|
Human   295 LNNCYLEELNFRNPLGMKGEIAEAYADLVKQAWSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQ 359

  Fly   714 EFLRFFLDSLHSALNSGVKGETLNIDD--NLSDNKKADLTWEWYTRHENSLVRDLFVGQLKSTLK 776
            |.|.|.||.||..||...|.|.:.:.|  ...|.:.|...|:.:.|..:|::.|.|.|..||||.
Human   360 ELLSFLLDGLHEDLNRVKKKEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLV 424

  Fly   777 CTTCGNTSVTFDPFWDLSVPLPSS----------------------------------------- 800
            |..|||.|||||||..||||||.|                                         
Human   425 CPDCGNVSVTFDPFCYLSVPLPISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKISDLCVALSKH 489

  Fly   801 ----------------------------------------------------------------- 800
                                                                             
Human   490 TGISPERMMVADVFSHRFYKLYQLEEPLSSILDRDDIFVYEVSGRIEAIEGSREDIVVPVYLRER 554

  Fly   801 ----------------------------------------------------------------- 800
                                                                             
Human   555 TPARDYNNSYYGLMLFGHPLLVSVPRDRFTWEGLYNVLMYRLSRYVTKPNSDDEDDGDEKEDDEE 619

  Fly   801 -----------------------------SRC--------------------------------- 803
                                         :||                                 
Human   620 DKDDVPGPSTGGSLRDPEPEQAGPSSGVTNRCPFLLDNCLGTSQWPPRRRRKQLFTLQTVNSNGT 684

  Fly   804 ----------------------------------------------------KLEACLDLFIREE 816
                                                                :|:.|::||...|
Human   685 SDRTTSPEEVHAQPYIAIDWEPEMKKRYYDEVEAEGYVKHDCVGYVMKKAPVRLQECIELFTTVE 749

  Fly   817 VLDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRWS--KLSNIVEFPTSDSELNMG 879
            .|:.:....|..||..:..||...:...|:.|:|||||||.|::|  ||..:||||..|.:.:..
Human   750 TLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEF 814

  Fly   880 SYGANSNSN---VHYSLYAISNHMGSTAGGHYVALCKHPVSRKWHEFNDNIVSDALSENHLVSSS 941
            .....:.||   ..|.|.|:|||.|....|||.....:..|.:||.|:||.|| .::||.:.|.:
Human   815 VIQPQNESNPELYKYDLIAVSNHYGGMRDGHYTTFACNKDSGQWHYFDDNSVS-PVNENQIESKA 878

  Fly   942 AYILFYER 949
            ||:|||:|
Human   879 AYVLFYQR 886

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp2NP_001285528.1 UCH 624..947 CDD:278850 128/619 (21%)
Peptidase_C19R 626..948 CDD:239139 128/618 (21%)
USP11NP_001358001.1 UBP12 56..886 CDD:227847 151/721 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1591
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.940

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