DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp2 and Usp50

DIOPT Version :9

Sequence 1:NP_001285528.1 Gene:Usp2 / 33132 FlyBaseID:FBgn0031187 Length:950 Species:Drosophila melanogaster
Sequence 2:NP_083439.2 Gene:Usp50 / 75083 MGIID:1922333 Length:390 Species:Mus musculus


Alignment Length:329 Identity:100/329 - (30%)
Similarity:167/329 - (50%) Gaps:13/329 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   622 EGLCGLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSLSTKDQQILHEFAKLIQEMWTANVH 686
            :|:.||||:||||:||:::|||.....|..:..|.....:|.....::...||.|:.:||..:..
Mouse    42 QGVTGLRNLGNTCYMNAILQCLCSVSPLVEYFLSGKYITALKKDCSEVTTAFAYLMTDMWLGDSD 106

  Fly   687 TVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHSALNSGVKGETLNIDDNLSDNKKADLT 751
            .|:|.....|..:.:..:....||||||||.:.|:.||.||....:       ..:::.:.....
Mouse   107 CVSPEIFLSAVGSLYPAFLKKTQQDAQEFLIYVLNELHEALKKHCR-------RRVNEKRTGQSC 164

  Fly   752 WEWYTRHENSLVRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREE 816
            .......|.|::..||.|||..::.|..|.:.:...:.|..||:|:||...|.|:.||..|.:::
Mouse   165 CRKVPAQETSIITRLFEGQLSYSITCLKCESCTHKNEVFTILSLPIPSDYECSLQDCLQCFFQQD 229

  Fly   817 VLDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRF--SETRWSKLSNIVEFPTSDSELNMG 879
            .|.......|:.|:.:::.....||.:.||.:|.|.|||  ..|...||...:.:|.::  |::.
Mouse   230 TLTWSNQIYCSFCEIKQEAAVRTTISKVPKIIVFHFKRFDIQGTVKRKLRTDIHYPLTN--LDLT 292

  Fly   880 SYGAN-SNSNVHYSLYAISNHMGSTAGGHYVALCKHPVSRKWHEFNDNIVSDALSENHLVSSSAY 943
            .|... ...:..|:|.|:.||.|...||||.|.||:.|::.|:.|:|..||: :.:..:.:::||
Mouse   293 PYICPVFRKHPMYNLCAVVNHFGDLDGGHYTAFCKNSVTQAWYSFDDTRVSE-IPDTSVQTATAY 356

  Fly   944 ILFY 947
            :|||
Mouse   357 LLFY 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp2NP_001285528.1 UCH 624..947 CDD:278850 97/325 (30%)
Peptidase_C19R 626..948 CDD:239139 99/325 (30%)
Usp50NP_083439.2 UCH 44..360 CDD:278850 97/325 (30%)
Peptidase_C19R 46..361 CDD:239139 99/325 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1868
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469048at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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