DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp2 and Usp29

DIOPT Version :9

Sequence 1:NP_001285528.1 Gene:Usp2 / 33132 FlyBaseID:FBgn0031187 Length:950 Species:Drosophila melanogaster
Sequence 2:XP_011248964.1 Gene:Usp29 / 57775 MGIID:1888998 Length:876 Species:Mus musculus


Alignment Length:469 Identity:104/469 - (22%)
Similarity:174/469 - (37%) Gaps:89/469 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   483 NRQPIE----CDSVVLTNKASKDATTAATPTVATATATHTPATSSVSTVTVTAAAPNSASDSVSR 543
            ::||:|    .|.:..::....:...||..::.|...:.||.:..:..............:...|
Mouse   117 SQQPMEPMSSQDDLESSDPFCGEHQEAACGSLNTTPESGTPLSRKMPLSMSNTTGGQKRGEKQGR 181

  Fly   544 SLARSPISSTLARSGTGSSSTARSVLPPMTPTSSRYWDRDSG------------TSRSSIGTSSA 596
            .....|.||    |...:....:...|.....|.||:.|:.|            ..||:.....|
Mouse   182 KRKTEPSSS----SAEVNKDIPKENTPDQKKKSRRYYSRNRGGKAEKAVTLREQEKRSNWKLEPA 242

  Fly   597 LNSSSLKHNSDDG----YKTASSSRDEKSEGL---------------------CGLRNIGNTCFM 636
            .||.|....:.||    ..|.|..||....||                     .|..|:||||:|
Mouse   243 FNSKSYGRANLDGTILPIATCSDDRDVSIFGLEIITHNGVQSLPDPYLNQLKREGFPNLGNTCYM 307

  Fly   637 NSVIQCLSHTQELTRFLRSHHGSRSLSTKDQQILHEFAKLI-QEMWTANVHTVTPMELKRAFSTK 700
            ||::|.:.......:.|.:........:.|..|:.....|: :::....:.......:|::.||.
Mouse   308 NSILQSVFGIPTFAKDLLTQGIPWEKVSYDDLIMPLSQLLVLKDIRDVEIKGELLTSVKKSISTV 372

  Fly   701 HRMYSDYNQQDAQEFLRFFLDSLHSALNSGVKGETLNIDDNLSDNKKADLTWEWYTRHENSL--- 762
            ...:|...|.||.|||...||.|           .||::       |.:..|:  |...|:.   
Mouse   373 ADTFSGNEQNDAHEFLSLCLDQL-----------KLNME-------KVNAMWD--TERRNTCAGS 417

  Fly   763 ---------VRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLSVPLPSSSR---CKLEACLDLFIRE 815
                     |...|..:|.|::.|..||..::..:....||:.|...::   ..::...|||...
Mouse   418 AGTKRFVCPVGANFEFELHSSIICEGCGEATIKTEVSNYLSIDLHHGTKTHPLSIQKSFDLFFTP 482

  Fly   816 EVLDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRWSKLSNIVEFPTSDSE-LNMG 879
            |.::.:    |.|||.:....| :|::|.|:.|::||||:..|. ..|....|.|...|: ||:.
Mouse   483 EKIEHN----CEKCKNKNSVLK-YTLRRLPRVLIVHLKRYQVTT-DLLPVKSEQPVEISKYLNIS 541

  Fly   880 SYGANSNSNVHYSL 893
            |: .:.|..:.:.|
Mouse   542 SH-CHENRKLPFPL 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp2NP_001285528.1 UCH 624..947 CDD:278850 71/308 (23%)
Peptidase_C19R 626..948 CDD:239139 70/285 (25%)
Usp29XP_011248964.1 PH_USP37_like 11..116 CDD:270122
UBP14 <297..830 CDD:227532 70/285 (25%)
UCH 297..>547 CDD:395355 68/276 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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