DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp2 and USP29

DIOPT Version :9

Sequence 1:NP_001285528.1 Gene:Usp2 / 33132 FlyBaseID:FBgn0031187 Length:950 Species:Drosophila melanogaster
Sequence 2:NP_001376572.1 Gene:USP29 / 57663 HGNCID:18563 Length:922 Species:Homo sapiens


Alignment Length:452 Identity:109/452 - (24%)
Similarity:166/452 - (36%) Gaps:115/452 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   483 NRQPIECDSVVLTNKASKDATTAAT--PTVATATATHTPA------TSSVSTVTVTAAAPNSASD 539
            ::.|......:|.|:..|...|.::  .|.........|.      |.|:..:......|:|..|
Human   151 SKSPTHVKKGILENQGGKGQNTLSSDVQTNEDILKEDNPVPNKKYKTDSLKYIQSNRKNPSSLED 215

  Fly   540 -SVSRSLARSPISSTLARSGTGSSSTARSVLPPMTPTSSRYWDRDSGTSRSSIGTSSALNSSSLK 603
             ...|.|...|..:|   :..|:.:...:||...|..:..             |.:|.|..   :
Human   216 LEKDRDLKLGPSFNT---NCNGNPNLDETVLATQTLNAKN-------------GLTSPLEP---E 261

  Fly   604 HN-SDDGYKTASSSRDEKSEGL-CGLRNIGNTCFMNSVIQCL----SHTQELTRFLRSHHGSRSL 662
            |: .|.....|....|..|:.| .|..|:||||:||:|:|.|    |...:|.            
Human   262 HSQGDPRCNKAQVPLDSHSQQLQQGFPNLGNTCYMNAVLQSLFAIPSFADDLL------------ 314

  Fly   663 STKDQQILHEFAKLIQEMWTANVHTVTPM-----------------ELKRAFSTKHRMYSDYNQQ 710
               .|.:..|:..     :.|.:.|:|.:                 .:|:..|....::|...|.
Human   315 ---TQGVPWEYIP-----FEALIMTLTQLLALKDFCSTKIKRELLGNVKKVISAVAEIFSGNMQN 371

  Fly   711 DAQEFLRFFLDSLH---SALNSGVKGETLNIDDNLSDNKKADLTWEWYTRHENSLVRDLFV---- 768
            ||.|||...||.|.   ..||:     |||......|...:.      ..|..|....:||    
Human   372 DAHEFLGQCLDQLKEDMEKLNA-----TLNTGKECGDENSSP------QMHVGSAATKVFVCPVV 425

  Fly   769 ----GQLKSTLKCTTCGNTSVTFDPFWDLSV-------PLPSSSRCKLEACLDLFIREEVLDGDE 822
                .:|:.:|.|..||:..:..:|...||:       |||.|    ::..||||.:||.|:.: 
Human   426 ANFEFELQLSLICKACGHAVLKVEPNNYLSINLHQETKPLPLS----IQNSLDLFFKEEELEYN- 485

  Fly   823 MPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFS-ETRWSKLSN--IVEFPTSDSELNMGSY 881
               |..|| ::.|....|..|..:.|:|||||:| ...|..:.|  .|..|.|   |::.||
Human   486 ---CQMCK-QKSCVARHTFSRLSRVLIIHLKRYSFNNAWLLVKNNEQVYIPKS---LSLSSY 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp2NP_001285528.1 UCH 624..947 CDD:278850 81/301 (27%)
Peptidase_C19R 626..948 CDD:239139 80/298 (27%)
USP29NP_001376572.1 PH_USP37_like 4..106 CDD:270122
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..196 6/35 (17%)
UCH 286..552 CDD:395355 80/298 (27%)
Peptidase_C19 <823..883 CDD:239072
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1868
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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