DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp2 and usp32

DIOPT Version :10

Sequence 1:NP_001285528.1 Gene:Usp2 / 33132 FlyBaseID:FBgn0031187 Length:950 Species:Drosophila melanogaster
Sequence 2:XP_068069823.1 Gene:usp32 / 557981 ZFINID:ZDB-GENE-100210-5 Length:1599 Species:Danio rerio


Alignment Length:1298 Identity:231/1298 - (17%)
Similarity:333/1298 - (25%) Gaps:701/1298 - (54%)


- Green bases have known domain annotations that are detailed below.


  Fly   258 ICY----FKPITPPLQLRHEQNQV------QQQEEQPQPS--------------------SSKSA 292
            :|:    .:|.||     .|:.|:      ::.....|||                    .:||.
Zfish   359 VCHIVLGLRPATP-----EEEGQIIRGWLERESRHGLQPSQNWFLISMQWWQQWKDYVRYDNKSI 418

  Fly   293 SHRYPRPKSTIIASAHSNFAASFEKFSGGLYRQTNGETNIESKTSSNARRYGIDSLSIKASIEKF 357
            ....|..:.:.:.|:.|  |||.|..                     ..|.|:...|..:..|||
Zfish   419 VMEQPSVQGSGMRSSQS--AASVEPI---------------------LNRIGLVVRSPSSPEEKF 460

  Fly   358 -NNLSGQKRQNPGSGSGIGP---GSATASGLGGGRLSVASRSNHGSQAGGSSSNLQQRYSSDLDN 418
             :|:|.....:..:|:.:.|   .|||         .|.....|     ..|.|..|.:||    
Zfish   461 PDNISSSSEASESTGNSLTPHISSSAT---------DVCFARQH-----NISDNNNQCFSS---- 507

  Fly   419 IRVAAGY-SSSLTRAAYRTTATMNSVSTPVAVTSELGGP---------------ISGDGGETA-- 465
               |.|: .:||  |..|..|..|.   |:..|..:..|               :||...||.  
Zfish   508 ---ANGHLPNSL--AVQRPGAIDNQ---PLVTTEPMKAPTLTMEGGRLKKSHQLLSGREFETVPE 564

  Fly   466 -------------TAMGQPTSKVTVRGAHSNRQP-IECDSVVLTNKASKDATTAATPTV------ 510
                         .::.:|..|.||:.     || :|...:.|.....:.||.:....:      
Zfish   565 PVWRALYHWYGANLSLPRPVIKSTVKA-----QPELELFPLYLLFLRQQPATRSPQSNIWVNMGM 624

  Fly   511 --ATATATHTPATSSVSTVTVTAAAPNSASDSVSRSLARSPISSTLARSGTGS-SSTARSVLPPM 572
              ......|.|..:        ..:||            :|:...||.:|..| ..|.:.:...:
Zfish   625 SSLRMFPPHMPRGN--------VPSPN------------APLKRVLAYTGCFSRMCTIKDIHEYL 669

  Fly   573 T------PTSSRYW------------DRDSGTSRSSIGTSSALNSSSLKH------NSDDGYK-- 611
            :      ....|.|            |.|.        |..:|.....:|      |.|..:.  
Zfish   670 SQRLRIKEEDMRLWLYNSENYLTLLDDEDH--------TLESLKIPDEQHLVIEVRNKDMSWPEE 726

  Fly   612 ---TASSSRDEK-----SEGLCGLRNIGNTCFMNSVIQCLSHTQELTR-FLRSHH---------- 657
               .|:||:.::     .:|..||.|:||||||||.|||:|:|:.||. |:...|          
Zfish   727 MSFIANSSKIDRHKVPTEKGATGLSNLGNTCFMNSSIQCVSNTKPLTEYFISGRHLYELNRTNPI 791

  Fly   658 GSRSLSTKDQQILHEFAKLIQEMWTANVHTVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDS 722
            |.|....|.      :..|:||:|:.....|.|::|:...:.....::.:.|||:||.|.|.||.
Zfish   792 GMRGHMAKC------YGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELLAFLLDG 850

  Fly   723 LHSALNSGVKGETLNI--DDNLSDNKKADLTWEWYTRHENSLVRDLFVGQLKSTLKCTTCGNTSV 785
            ||..||...:...:.:  .|...|::.|...||.:.|...|:|.|||.|||:|.:||.|||:.|.
Zfish   851 LHEDLNRVHEKPYVELKDSDGRPDHEVATEAWENHLRRNRSIVVDLFHGQLRSQVKCKTCGHISA 915

  Fly   786 TFDPFWDLSVPLPSSSR------------------------------------------------ 802
            .||||..||:|||..|.                                                
Zfish   916 RFDPFNFLSLPLPMDSSMHLEITVIKLDGSTPVRYGLRLNMDEKYMGLKKQLSELCSLKPEQILL 980

  Fly   803 ----------------------------------------------------------------- 802
                                                                             
Zfish   981 AEVHTSNIKNFPLDNQKVRHSVNGFLCAFEIPVPGSPTSVTSPVQTEKPPIANGTAGNNHIGKSG 1045

  Fly   803 ----------------------------------------------------------------- 802
                                                                             
Zfish  1046 LIPNGMPSTVVPCTLEKPLANGIPNGHAVPVQDSPFIGYIIAMHRKMMRTELYFLSSQKNRPSLF 1110

  Fly   803 ----------------------------------------------------------------- 802
                                                                             
Zfish  1111 GMPLIVPCTVHTSKKDLYDAVWIQVSRLASPLPPQEASNHAQDCDDSLGYQYPFTLRVVQKDGNS 1175

  Fly   803 ---------CK------------------------------------------------------ 804
                     |:                                                      
Zfish  1176 CAWCPWYRFCRGCTVDCNEDRASLGNAYIAVDWDPTALHLRYQTSQERIVEEHPSVEQSRRAQAE 1240

  Fly   805 ---LEACLDLFIREEVLDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFS--ETRWSKLS 864
               |::||..|..||.|..||:..|:||||.|..||...:.|.|..|::|||||.  ..||.|..
Zfish  1241 PISLDSCLKAFTSEEELGEDELYYCSKCKTHRLATKKLDLWRLPPVLIVHLKRFQFVNGRWIKSQ 1305

  Fly   865 NIVEFP----------------------------------------------------------- 870
            .||:||                                                           
Zfish  1306 KIVKFPRESFDPSAFLAPREVSQSLGSLQSLQSECLVEELQRLERGDSSVSSISTTTLASPPISG 1370

  Fly   871 -----------------------------------------------------------TSDSEL 876
                                                                       .|:||.
Zfish  1371 RATPCSIRRVGSPLSRNSSPGSSPRNTGRKQGRLRLPQLGSRHRLCNSKENLEACSTNKESESEA 1435

  Fly   877 NMG------------------SYGANSN----------------SNVH----------------- 890
            ...                  |..|:||                ||.|                 
Zfish  1436 EQSAVTDGENLTPDANTQDTWSLDASSNDCDVIMVNGLGQDSSQSNGHSEVSADLDTPHQRNDIC 1500

  Fly   891 ----YSLYAISNHMGSTAGGHYVALCKHPVSRKWHEFNDNIVSDALSENHLVSSSAYILFYER 949
                |:|||||.|.|...|||||...|:| :.||:.:||:...:..|: .:.:.||||||||:
Zfish  1501 LESLYNLYAISCHSGIMGGGHYVTYAKNP-NEKWYCYNDSSCKEVHSD-EIDTDSAYILFYEQ 1561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp2NP_001285528.1 UBP12 <620..>800 CDD:227847 74/197 (38%)
Peptidase_C19R 626..948 CDD:239139 143/818 (17%)
usp32XP_068069823.1 EFh_DMD_DYTN_DTN <82..151 CDD:352774
EF-hand-like motif 92..124 CDD:319999
EF-hand-like motif 128..151 CDD:319999
EFh 237..293 CDD:238008
EF-hand_7 270..342 CDD:463900
DUSP 393..>426 CDD:399383 4/32 (13%)
UBP12 521..1560 CDD:227847 185/1082 (17%)
Blue background indicates that the domain is not in the aligned region.

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