DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp2 and Usp2

DIOPT Version :9

Sequence 1:NP_001285528.1 Gene:Usp2 / 33132 FlyBaseID:FBgn0031187 Length:950 Species:Drosophila melanogaster
Sequence 2:NP_058088.2 Gene:Usp2 / 53376 MGIID:1858178 Length:619 Species:Mus musculus


Alignment Length:732 Identity:237/732 - (32%)
Similarity:329/732 - (44%) Gaps:177/732 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 PATGGPEAGISTTKTSICYFKPITPPLQLRHEQNQVQQQEEQPQ---PSSSKSASHRYPRPKSTI 303
            |::.|.....|..:.....|||::|...|           .:|:   |||........|..:|.|
Mouse    32 PSSYGANLAASFLEKEKLGFKPVSPTSFL-----------PRPRTYGPSSILDCDRGRPLLRSDI 85

  Fly   304 IASAHSNFAASFEKFSGGLYRQTNGETNIESKTSSNARRYGIDSLSIKASIEKFNNLSGQKRQNP 368
            |.|:..:                      ||:|..|.|                           
Mouse    86 IGSSKRS----------------------ESQTRGNER--------------------------- 101

  Fly   369 GSGSGIGPGSATASGLGGGRLSV--ASRSNHGSQAGGSSSNLQQRYSSDLDNIRVAAGYSSSLTR 431
            .||||:..||..:.|:....||.  .:..:.|.......||.|...:.|..::|.:.||.:|   
Mouse   102 PSGSGLNGGSGFSYGVSSNSLSYLPMNARDQGVTLSQKKSNSQSDLARDFSSLRTSDGYRTS--- 163

  Fly   432 AAYRTTATMNSVSTPVAVTSELGGPIS-GDGGETATAMGQPTSKVTVRGAHSNRQPIECDSVVLT 495
            ..|||:.               |..|. |:.|.:............::|.:......|..:..|.
Mouse   164 DGYRTSE---------------GFRIDPGNLGRSPMLARTRKELCALQGLYQAASRSEYLTDYLE 213

  Fly   496 NKASKDATTAATPTVATATATHTPATSSVSTVTVTAAAPNSASDSVSRSLARSPISSTLARSGTG 560
            |...|    .:.|.|                  :|.|.|.|          |.|           
Mouse   214 NYGRK----GSAPQV------------------LTQAPPPS----------RVP----------- 235

  Fly   561 SSSTARSVLPPMTPTSSRY--WDRD----SGTSRSSIGTSSALNSSSLKHNSDDGYKTASSSRDE 619
                  .||.|....|.||  |::.    ||.||||......:||.|                  
Mouse   236 ------EVLSPTYRPSGRYTLWEKSKGQASGPSRSSSPGRDTMNSKS------------------ 276

  Fly   620 KSEGLCGLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSL---STKDQQILHEFAKLIQEMW 681
             ::||.||||:||||||||::||||:|:||..:.......|.|   |:....::.|||||||.:|
Mouse   277 -AQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQTIW 340

  Fly   682 TANVH-TVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHSALN-----SGVKGETLNIDD 740
            |::.: .|:|.|.|.........:..||||||||||||.||.||:.:|     .....|||   |
Mouse   341 TSSPNDVVSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASPETL---D 402

  Fly   741 NLSDNKKADLTWEWYTRHENSLVRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLSVPLPSSS--RC 803
            :|.|.:|....|..|...|:|.:.|||||||||:|.||.||..|..||||||||:|:....  ..
Mouse   403 HLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV 467

  Fly   804 KLEACLDLFIREEVLDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFSET--RWSKLSNI 866
            .|..|:.||.:|::|||||.|||.:|:.|::|.|.|::|||||.||:|||||||:  |.|||:..
Mouse   468 TLMDCMRLFTKEDILDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTF 532

  Fly   867 VEFPTSDSELNMGSYGANSNSNVHYSLYAISNHMGSTAGGHYVALCKHPVSRKWHEFNDNIVSDA 931
            |.||..|  |::..:.:.:.::..|:|||:|||.|:|.||||.|.|:.||:.:||.|||:.|: .
Mouse   533 VNFPLRD--LDLREFASENTNHAVYNLYAVSNHSGTTMGGHYTAYCRSPVTGEWHTFNDSSVT-P 594

  Fly   932 LSENHLVSSSAYILFYE 948
            :|.:.:.:|.||:||||
Mouse   595 MSSSQVRTSDAYLLFYE 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp2NP_001285528.1 UCH 624..947 CDD:278850 157/335 (47%)
Peptidase_C19R 626..948 CDD:239139 157/334 (47%)
Usp2NP_058088.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 54..112 11/60 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 221..275 8/54 (15%)
UCH 281..610 CDD:395355 122/345 (35%)
Necessary for interaction with MDM4. /evidence=ECO:0000250|UniProtKB:O75604 417..517 50/103 (49%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 303 1.000 Domainoid score I1391
eggNOG 1 0.900 - - E1_KOG1868
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469048at33208
OrthoFinder 1 1.000 - - FOG0000821
OrthoInspector 1 1.000 - - otm43678
orthoMCL 1 0.900 - - OOG6_101021
Panther 1 1.100 - - LDO PTHR21646
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1591
SonicParanoid 1 1.000 - - X4948
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.810

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