DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp2 and Usp21

DIOPT Version :9

Sequence 1:NP_001285528.1 Gene:Usp2 / 33132 FlyBaseID:FBgn0031187 Length:950 Species:Drosophila melanogaster
Sequence 2:NP_038947.2 Gene:Usp21 / 30941 MGIID:1353665 Length:566 Species:Mus musculus


Alignment Length:549 Identity:185/549 - (33%)
Similarity:264/549 - (48%) Gaps:68/549 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   446 PVAVTSELGGPISGDGG---ETATAMGQPTSKVTV----RGAHSN---RQPIECDSVVLTNKASK 500
            |.|.:.|...|:.|...   ......|.|..::..    ||..|.   |.|:..|..|....:..
Mouse    31 PRARSKERRNPVPGPNSMLRPLPPRPGPPDERLKKLELGRGRTSGSRPRGPLRADHGVPLPGSPP 95

  Fly   501 DATTAATPTVATATATHTPATSSVSTVTVTAAAPNSASD---SVSRSLARSPISSTLARSGTGSS 562
            .|.....|:......:.:.::..:..:.:.......|.:   ::|| ||..|...||.||   :|
Mouse    96 PAVALPLPSRTNLARSKSVSSGDLRPMGIALGGHRGAGELGAALSR-LALRPEPPTLRRS---TS 156

  Fly   563 STARSVLP-PMTPTSSRYWDRDSGTSRSSIGTSSALNSSSLKHNSDDGYKTASSSRDEKSEGLCG 626
            .......| |.|..|.|   .:..||..|....||..|...  .|||  |.|..:. ....|..|
Mouse   157 LRRLGGFPGPPTLLSIR---TEPPTSHGSFHMISARPSEPF--YSDD--KMAHHTL-LLGSGHVG 213

  Fly   627 LRNIGNTCFMNSVIQCLSHTQELTRF-LRSHH------GSRSLSTKDQQILHEFAKLIQEMW-TA 683
            |||:|||||:|:|:||||.|:.|..| ||...      |.|:     |::...||.:|..:| ..
Mouse   214 LRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRA-----QELTEAFADVIGALWHPD 273

  Fly   684 NVHTVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHSALN-----------SGV------ 731
            :...|.|...:..|......:|.|:||||||||:..::.||..:|           ||.      
Mouse   274 SCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILASGPVPSPPC 338

  Fly   732 -KGETLNIDDNLSDNKKADLTWEWYTRHENSLVRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLSV 795
             .|..|:.:..|||:.:|:|.|:.|...|:|.:.|||||||||.|||..||..|.||:.|.|||:
Mouse   339 RGGGALHEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSL 403

  Fly   796 PLP----SSSRCKLEACLDLFIREEVLDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFS 856
            |:|    :..:..|..|..||.:||.|:.:..|.|.:|:.:.:.||..|:||||:.||:||.|||
Mouse   404 PIPKKGFAGGKVSLRDCFSLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS 468

  Fly   857 ETRWS-KLSNI-VEFPTSDSELNMGSYGANSNSNVHYSLYAISNHMGSTAGGHYVALCKHPVSRK 919
            .:|.| |.|:: |:||.  ..|::|.:.::...:..|.|||:.||.||...|||.|||:  ....
Mouse   469 TSRGSIKKSSVGVDFPL--QRLSLGDFASDKAGSPVYQLYALCNHSGSVHYGHYTALCR--CQTG 529

  Fly   920 WHEFNDNIVSDALSENHLVSSSAYILFYE 948
            ||.:||:.|| .:|||.:.||..|:|||:
Mouse   530 WHVYNDSRVS-PVSENQVASSEGYVLFYQ 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp2NP_001285528.1 UCH 624..947 CDD:278850 139/354 (39%)
Peptidase_C19R 626..948 CDD:239139 140/353 (40%)
Usp21NP_038947.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..103 15/71 (21%)
Nuclear export signal. /evidence=ECO:0000250 134..152 6/18 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 146..169 8/25 (32%)
UCH 212..556 CDD:278850 139/353 (39%)
Peptidase_C19R 213..557 CDD:239139 140/353 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 324..349 4/24 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847274
Domainoid 1 1.000 303 1.000 Domainoid score I1391
eggNOG 1 0.900 - - E1_KOG1868
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000821
OrthoInspector 1 1.000 - - otm43678
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21646
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.800

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