DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp2 and ubp16

DIOPT Version :9

Sequence 1:NP_001285528.1 Gene:Usp2 / 33132 FlyBaseID:FBgn0031187 Length:950 Species:Drosophila melanogaster
Sequence 2:NP_587805.1 Gene:ubp16 / 2538947 PomBaseID:SPCC1682.12c Length:457 Species:Schizosaccharomyces pombe


Alignment Length:452 Identity:124/452 - (27%)
Similarity:189/452 - (41%) Gaps:71/452 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   532 AAPNSASDSVSRSLARSP--ISSTLARSGT--------GSSSTARSVLPPMTPTSSRYWDRDSGT 586
            |..:|..|.:...:...|  :||.....||        .|:.:.:|...|.:||.    ::.||:
pombe    14 AVKHSLDDLLKNPVRFRPAVVSSPSVPEGTYTVLNNPKQSTVSRKSFSAPTSPTR----NKRSGS 74

  Fly   587 SRSSIGTSSALNSSSLKHNSDDG------------YKTASSSRDEKSEGLCGLRNIGNTCFMNSV 639
            |......||...........|:.            .:..|...|.......||.|:|||||||||
pombe    75 SSQEYKKSSGTRGDGANDFVDEDPAFIPPARILFPEEKLSMEWDNIMPNAPGLVNLGNTCFMNSV 139

  Fly   640 IQCLSHTQELTRFLRSHHGSRSLSTK---------DQQILHEFAKLIQEMWTANVHTVTPMELKR 695
            :|.::.|..|.::|.|  |..|||.:         :|.:    |:......|.......|..::.
pombe   140 LQLMTQTPPLVQYLLS--GQHSLSCRMNACVLCRMEQHV----ARAYPNKGTKRASAFKPSGIQS 198

  Fly   696 AFSTKHRMYSDYNQQDAQEFLRFFLDSLHSALNSGVKGETLNIDDNLSDNKKADLTWEWYTRHEN 760
            ........:..|.|:||.||:|:.:|:...:.              |.::|..|     :...|.
pombe   199 MLKVISSHFRPYRQEDAHEFMRYLVDAWQKSC--------------LQNHKNLD-----HPSRET 244

  Fly   761 SLVRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEVLDGDEMPT 825
            |:|..:|.|.|:..:.|:.|...|.|:....||||....||   |...|..|:..|.|.......
pombe   245 SVVHRIFGGYLRQQILCSVCKKPSNTYQALLDLSVDAKGSS---LADSLKHFVHAEKLTKQNKYR 306

  Fly   826 CAKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRW--SKLSNIVEFPTSDSELNMGSYGANSNSN 888
            |..||.....:|..||.|.|..|.||.|||:...:  ||:|..:.:|.|   .|:|.|.::.|.:
pombe   307 CENCKQLVDASKQMTIYRAPNILTIHFKRFTFNGFQSSKISKQISYPES---FNLGPYMSDPNCS 368

  Fly   889 VHYSLYAISNHM-GSTAGGHYVALCKHPVSRKWHEFNDNIVSDALSENHLVSSSAYILFYER 949
            ..|.|..:..|. |||..|||.:.||.. :..|.:|:|:.||:: |.:.:::..||||.|:|
pombe   369 CWYELIGVLVHAGGSTRSGHYYSFCKSS-NGVWLKFDDDFVSNS-SIDRVLNQQAYILQYKR 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp2NP_001285528.1 UCH 624..947 CDD:278850 101/334 (30%)
Peptidase_C19R 626..948 CDD:239139 101/333 (30%)
ubp16NP_587805.1 Peptidase_C19E 124..426 CDD:239126 101/334 (30%)
UCH 126..426 CDD:278850 101/332 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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