Protein Alignment Usp2 and usp-3

DIOPT Version :9

• Sequence 1: NP_001285528.1
• Gene: Usp2 / 33132
• FlyBaseID: FBgn0031187
• Length: 950
• Species: Drosophila melanogaster
• Sequence 2: NP_493434.3
• Gene: usp-3 / 190579
• WormBaseID: WBGene00013506
• Length: 550
• Species: Caenorhabditis elegans
• Alignment Length: 444
• Identity: 129/444 - (29%)
• Similarity: 207/444 - (46%)
• Gaps: 71/444 - (15%)

  Fly   528 TVTAAAPNSASDSVSRSLARSPIS--STLARSGTGSSSTARSVLPPMTPTSSRYWDRDSGTSRSS 590
            |||     |.:.:.::.|..:|.|  |...|...|..|......||        :.:..|.:...
 Worm   150 TVT-----SVASTFTQKLHVAPASRNSKKKRGKKGKVSPMFVDTPP--------FQQQQGAAVIH 201

  Fly   591 IGTSSALNSSSLKHNSDDGYKTASSSRDEKSEGLCGLRNIGNTCFMNSVIQCLSHTQELTRFLRS 655
            ..|.|:.||:|    |..|..|:||....:..   |:||:|||||||:|:|.|:...|...::
 Worm   202 DVTLSSTNSTS----SGSGGATSSSEIAYRPR---GMRNVGNTCFMNAVLQALASISEFREYI-- 257

  Fly   656 HHGSRSLSTKDQQI---------------LHEFAKLIQEMWTANVHTVT-PMELKRAFSTKHRMY 704
                .|||:.:..|               ..|:.||:......:....| |.|.:.||.:....:
 Worm   258 ----MSLSSLEDYIHDEKEPKNGGNYCYLTDEYRKLLISQSARSFREPTAPNEFREAFISVCPRF 318

  Fly   705 SDYNQQDAQEFLRFFLDSLHSALNSGVKGETLNIDDNLSDNKKADLTWEWYTRHENSLVRDLFVG 769
            ..:.|.|:.||:|:|:||||:.:.   |...|   ..:.|:|             ::.:...|.|
 Worm   319 RGFRQHDSHEFMRYFMDSLHTEMR---KCRKL---PGMPDDK-------------HTPISKYFEG 364

  Fly   770 QLKSTLKCTTCGNTSVTFDPFWDLSVPLP---SSSRCKLEACLDLFIREEVLDGDEMPTCAKCKT 831
            .|:|::.|.||.|.|...|.|.|||:.:|   ::|:.:|..||..|.:.|:|:..|.|.||||||
 Worm   365 TLQSSVICQTCRNCSNKIDEFMDLSLDIPAQRNASKVRLSDCLSTFFKLEMLEKGEKPECAKCKT 429

  Fly   832 RRKCTKSFTIQRFPKYLVIHLKRFSETRWSKLSNIVEFPTSDSELNMGSYGANSNSNVHYSLYAI 896
            ::.|:|...|::.|:.|.:|:|||.: ...|...|::||....::.......:..:...|||.:|
 Worm   430 KQTCSKQMFIRKLPQVLCLHMKRFRD-NGGKNDAIIDFPMGQLDVTQFLTDDSDEAPCTYSLQSI 493

  Fly   897 SNHMGSTAG-GHYVALCKHPVSRKWHEFNDNIVSDALSENHLVSSSAYILFYER 949
            ..|:|...| |||:|..|.  :.:|.:|:|.:|. .:.|.|:....||:|.|.:
 Worm   494 IVHIGYGCGSGHYIAFGKR--NGRWFQFDDTVVK-GVDEAHVSKQKAYVLLYTK 544

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usp2	NP_001285528.1	UCH	624..947	CDD:278850	104/342 (30%)
		Peptidase_C19R	626..948	CDD:239139	104/341 (30%)
usp-3	NP_493434.3	zf-UBP	53..111	CDD:366940
		UCH	229..542	CDD:366104	104/344 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D469048at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		otm14283
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1591
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	4.950