Protein Alignment Usp2 and Usp43

DIOPT Version :9

• Sequence 1: NP_001285528.1
• Gene: Usp2 / 33132
• FlyBaseID: FBgn0031187
• Length: 950
• Species: Drosophila melanogaster
• Sequence 2: XP_038940907.1
• Gene: Usp43 / 100147704
• RGDID: 2303824
• Length: 1136
• Species: Rattus norvegicus
• Alignment Length: 719
• Identity: 137/719 - (19%)
• Similarity: 204/719 - (28%)
• Gaps: 326/719 - (45%)

  Fly   533 APNSASDSVSRSLARSPISSTLARSGTGSSSTARSVLPPMTPTSSRYWDRD-SGTSRSSIGTSSA 596
            ||........|.|....:.:.::||.:|.|       ||..|.....:|.| .|....:.|.:.|
  Rat    15 APRPRRRRSLRRLLNRFLLALVSRSRSGDS-------PPRAPAQPSPYDGDGEGGFACAPGPAPA 72

  Fly   597 LNSSSLKHNSDDGYKTASSSRDEKSEGLCGLRNIGNTCFMNSVIQCLSHTQELTRFL-----RSH 656
            .:.|.............||....:..|..||:|.|||||||:|:||||:|..|..||     |:.
  Rat    73 SSGSPGPDRPLGSQPQISSGDGARPPGAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYRAV 137

  Fly   657 HGSRSLSTKDQQILHEFAKLIQEMWTANVHTVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLD 721
            .|.       .::..:.|.|::.:||.........|.|.|.|.....:...:|.||.|||.:.||
  Rat   138 PGR-------AEVTEQLAALVRALWTREYTPQLSAEFKNAVSKYGSQFQGNSQHDALEFLLWLLD 195

  Fly   722 SLHSALNSGVKG--------ETLNIDDNLSDNKKADLTWEWYTRHENSLVRDLFVGQLKSTLKCT 778
            .:|..|.....|        |...|.::|..:........       |.|:..|..|.:|:|.|.
  Rat   196 RVHEDLEGSTHGQGSEQLPPEASKISEDLRSSAAPPSLGP-------SFVQSHFQAQYRSSLTCP 253

  Fly   779 TCGNTSVTFDPFWDLSVPLP--------------------------------------------- 798
            .|...|.|||||..:|:|:|
  Rat   254 HCLKQSNTFDPFLCVSLPIPLRQTRFLSVTLVFPSKSQRFLRVGLAVPILSTVAALRKMVAEEGG 318

  Fly   799 ----------------------------------------------------------------- 798
                                                                             
  Rat   319 VPAEEVILVELYPNGFQRSFFDEEDLNTIAEGDNVYAFQVPPLPGPGTLAAHPPGLSVSPRLAVR 383

  Fly   799 ---------------------------SSSR---------------------------------- 802
                                       .:||
  Rat   384 DSQRFSVPLHSENRVLILFCNLVGSGQQASRFGPPFLIREDRTISWAQLQQCILSKVRCLMRNEV 448

  Fly   803 ----------------------------------------------------------------- 802
                                                                             
  Rat   449 SAQDLGTLFSIRVVGLSLACSYLSPQDSRPLCHWAVDRALHLRRPGGPPHVKLAVEWDSSVTERL 513

  Fly   803 --------------------------CKLEACLDLFIREEVLDGDEMPTCAKCKTRRKCTKSFTI 841
                                      |.|:.|...:.:||.|..|:...|..|:..::.....::
  Rat   514 FGSLQEERVQDADSVWRQQQAHQQPSCTLDECFQSYTKEEQLAQDDAWKCPHCQVLQQGVVKLSL 578

  Fly   842 QRFPKYLVIHLKRFSET--RWSKLSNIVEFPTSDSELNMGSYGANSNSNVH-------------- 890
            ...|..|:||||||.:.  |.:|||.:|:||.|.  |||..:.|..::|..
  Rat   579 WTLPDILIIHLKRFCQVGERRNKLSTLVKFPLSG--LNMAPHVARRSTNSKAGPGPWSSWKQPIC 641

  Fly   891 ----------YSLYAISNHMGSTAGGHYVALCKHPVSRKWHEFNDNIVSDALSENHLVSSSAYIL 945
                      |.|||:.||.||..||||.|.|::.:..:|:.::|:.| :.|.|:.:.:..||||
  Rat   642 LPTTYPLDFLYDLYAVCNHHGSLQGGHYTAYCRNSLDGQWYSYDDSTV-EPLREDEVNTRGAYIL 705

  Fly   946 FYER 949
            ||::
  Rat   706 FYQK 709

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usp2	NP_001285528.1	UCH	624..947	CDD:278850	115/623 (18%)
		Peptidase_C19R	626..948	CDD:239139	116/622 (19%)
Usp43	XP_038940907.1	UBP12	<77..711	CDD:227847	120/650 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1868
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900