DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp2 and usp37

DIOPT Version :9

Sequence 1:NP_001285528.1 Gene:Usp2 / 33132 FlyBaseID:FBgn0031187 Length:950 Species:Drosophila melanogaster
Sequence 2:XP_002933983.2 Gene:usp37 / 100124313 XenbaseID:XB-GENE-984278 Length:976 Species:Xenopus tropicalis


Alignment Length:661 Identity:162/661 - (24%)
Similarity:243/661 - (36%) Gaps:176/661 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   354 IEKFNNLSGQKRQNPGSGSGIGPGSATASGLGGGRLSVASRSNHGSQA-------GGSSSNLQQR 411
            |||.|........|.|       |..|...|.....::..:.|.|:|:       ..||..:.:.
 Frog    30 IEKDNKYCLVVNYNAG-------GMPTRFQLNQNIKTIVVKPNGGTQSRFMLTLKDASSLTIDKV 87

  Fly   412 YSSDLDNIRVAAGYSSSLTRAAYRTTATMNSVSTPVAVTSELGGPISGDGGETATAM-------- 468
            ...|.:|::   .:..||.:|.             :..:::..|..||..|..:|.:        
 Frog    88 PLKDAENLK---HFLESLDKAT-------------IVKSNQGSGSFSGVLGNRSTQIEANRPLLN 136

  Fly   469 --GQPTSKVTVRGAHSNRQPIECDSVVLTNKASKDATTAATPTVATATATHTPATSSVSTVTVTA 531
              ..|:.:|:..|  .:..|::   .:|:|       |...|..::...|   .:|..|.:.||.
 Frog   137 KTQTPSKRVSFDG--KDETPVK---KLLSN-------TGRAPVKSSPGNT---VSSGRSGINVTP 186

  Fly   532 AAPNSASDSVSRSLARSPI----------------SSTL--ARSGTG------------------ 560
            :.|...|...|||..|..|                |||.  |.|.||                  
 Frog   187 SPPQRTSMMESRSEKRKRIQTPSPEIVEDYPKENDSSTTNKALSDTGRRFLNSSREKQLSLKQTE 251

  Fly   561 ----------SSSTARSVLPPMT-PTSSRYWDRDSGTS------RSSIGTS--SALNSSSLKHNS 606
                      |||...|.|.|.. .||:.|.||.|.:|      ||.:..|  |.|:...||.|.
 Frog   252 ENRQGLMPLQSSSFYSSRLTPKEFTTSNTYPDRSSASSQPPPAKRSLVLPSQPSPLSVKKLKPNQ 316

  Fly   607 D-DGY-KTASSSRDEKSEGLCGLRNIGNTCFMNSVIQCLSHTQELTR-FLRSHHGSRSLSTKDQQ 668
            | .|: |....|...:.:.|.|..|:||||:||:::|.|...|.... .|:.....|.:.|  ..
 Frog   317 DYPGWNKQRVLSTHPQPQQLQGFSNLGNTCYMNAILQSLFSLQPFAHDLLKQGIPYRKIPT--NA 379

  Fly   669 ILHEFAKLI--QEMWTANVHTVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLH---SALN 728
            ::..||.|:  :::.:..|......::|.|.|.....:|.|.|.||.|||...||.|.   ..||
 Frog   380 LIRRFAHLLAKKDICSPEVKKDLLKKVKSAISATAERFSGYMQNDAHEFLSQCLDQLKEDMGKLN 444

  Fly   729 SGVKGETLNIDDNLSDNKKADLTWEWYTRHENSLVRDLFVGQLKSTLKCTTCGNTSVTFDPFWDL 793
            ...|.|..:.||........||:...||    ..|...|..:::.::.|..||.|....:.|.||
 Frog   445 KTWKTELSSGDDVPGVKANDDLSTRIYT----CPVTCNFEFEVQHSIICKICGETVNKREQFNDL 505

  Fly   794 SVPL-----PSSSRCKLEACLDLFIREEVLDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLK 853
            |:.|     ||.|| .::..||||.|.|.|:    ..|.|| :.:..|......|.|:.|::|||
 Frog   506 SIDLPRRKKPSPSR-SIQDSLDLFFRLEDLE----YACEKC-SGKSATVMHKFSRLPRILILHLK 564

  Fly   854 RFSETRWSKLSNIVEFPTSDSELNMGSYGANSNSNVHYSLYAISNHMGS--------TAGGHYVA 910
            |:|                              .||   :.:::|.:|.        |...|...
 Frog   565 RYS------------------------------FNV---ILSLNNKVGQQVVIPRYLTLSSHCTE 596

  Fly   911 LCKHPVSRKWH 921
            ..:.|:|..|:
 Frog   597 STRTPLSLGWN 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp2NP_001285528.1 UCH 624..947 CDD:278850 86/317 (27%)
Peptidase_C19R 626..948 CDD:239139 85/315 (27%)
usp37XP_002933983.2 UCH_N 4..104 CDD:293279 18/83 (22%)
Peptidase_C19 338..>598 CDD:239072 82/304 (27%)
UCH 338..>596 CDD:278850 82/302 (27%)
Peptidase_C19 338..>383 CDD:271592 14/46 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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