DRSC/TRiP Functional Genomics Resources

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Protein Alignment tilB and Lrrcc1

DIOPT Version :10

Sequence 1:NP_608460.1 Gene:tilB / 33130 FlyBaseID:FBgn0014395 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_001157051.1 Gene:Lrrcc1 / 71710 MGIID:1918960 Length:1026 Species:Mus musculus


Alignment Length:328 Identity:89/328 - (27%)
Similarity:130/328 - (39%) Gaps:105/328 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LISTLEEISLHQEDIEVIEHIQN-WCRDLKILLLQSNLIARLENLHKLKRLEYLNVAINNIERVE 82
            |.|::..|:||..:|..|..|.: |  :|:.|.|.||.|:::|.|:.|.:|..||::.|.|.|||
Mouse    36 LDSSIHAINLHCNNISKISSIDHIW--NLRHLDLSSNQISQIEGLNTLTKLCTLNLSCNLITRVE 98

  Fly    83 NLEGCESLSKLDLTLNFIRELTSVESLCG-NYNLR--------------------------ELVL 120
            .||...:|:||:|:.|.|.:|:.:..|.| .|.||                          .|:|
Mouse    99 GLEALVNLTKLNLSYNHINDLSGLMPLHGLKYKLRYIDLHSNYIDSIHHLLQCTVGLHFLTNLIL 163

  Fly   121 ----IGNPCVDYPHYRDYVVATLPQLNSLDC---------VEITPSERLRALRELSKNRSIIVQK 172
                .|||....|.||..::.|||||..|||         :|...|..|:.|..|..|   :|..
Mouse   164 EKDGEGNPICLIPGYRAIILQTLPQLRILDCKNIFGEPVSLEEINSSHLQCLEGLLDN---LVSS 225

  Fly   173 QVEQDIERDEQRIRVAKQQSALAEHCAGIEDEEERIKAFWQAKSEHCPEIRTEIARQHRLGRERH 237
            ....:|..||                  :.|:   :.|   ...:..|.::              
Mouse   226 DSPLNISEDE------------------VNDD---VSA---PPMDVLPSLK-------------- 252

  Fly   238 ETKSPLDPLKPQRNLFA------PCGRPYNLNQAKLPFKFRDEA-----DHYLLQLEVYRHLDTS 291
            |.||     .|:.|:.|      |...|..:||..   .|::|.     |..:|||  ....:.|
Mouse   253 EFKS-----TPEDNVLASLLSVCPSSEPEKINQEN---DFQNEVKLQKLDDQILQL--LNETNNS 307

  Fly   292 LID 294
            |||
Mouse   308 LID 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tilBNP_608460.1 PPP1R42 <23..155 CDD:455733 56/172 (33%)
leucine-rich repeat 23..45 CDD:275378 7/22 (32%)
leucine-rich repeat 46..67 CDD:275378 9/20 (45%)
leucine-rich repeat 68..89 CDD:275378 10/20 (50%)
leucine-rich repeat 90..114 CDD:275378 9/24 (38%)
Lrrcc1NP_001157051.1 PPP1R42 25..197 CDD:455733 56/162 (35%)
LRR 1 39..60 6/20 (30%)
leucine-rich repeat 43..61 CDD:275378 7/19 (37%)
LRR 2 61..82 8/20 (40%)
leucine-rich repeat 62..83 CDD:275378 9/20 (45%)
LRR 3 83..104 10/20 (50%)
leucine-rich repeat 84..105 CDD:275378 10/20 (50%)
LRR 4 105..126 7/20 (35%)
leucine-rich repeat 106..131 CDD:275378 9/24 (38%)
LRR 5 131..152 2/20 (10%)
leucine-rich repeat 132..145 CDD:275378 2/12 (17%)
leucine-rich repeat 158..188 CDD:275380 10/29 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 310..338 1/1 (100%)
SMC_N 467..>766 CDD:481474
SMC_prok_B <646..1026 CDD:274008
Blue background indicates that the domain is not in the aligned region.

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