DRSC/TRiP Functional Genomics Resources

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Protein Alignment tilB and sds22

DIOPT Version :9

Sequence 1:NP_608460.1 Gene:tilB / 33130 FlyBaseID:FBgn0014395 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_650619.1 Gene:sds22 / 42091 FlyBaseID:FBgn0028992 Length:326 Species:Drosophila melanogaster


Alignment Length:158 Identity:51/158 - (32%)
Similarity:76/158 - (48%) Gaps:24/158 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KKSEHNERLISTLEEISLHQEDIEVIEHIQNWCRDLKILLLQSNLIARLENLHKLKRLEYLNVAI 75
            ||.|:.|.|:: |.::.|.:..|..||::.... :|:||.||:|.|.::|||.||..|..|.|:.
  Fly   162 KKIENIEMLVN-LRQLFLGKNKIAKIENLDTLV-NLEILSLQANRIVKIENLEKLANLRELYVSE 224

  Fly    76 NNIERVENLEGCESLSKLDLTLNFIR------ELTSVESLCGNYN----------------LREL 118
            |.:|.:|||.....|..|||..|.::      :|..:|.|..|:|                |:.:
  Fly   225 NGVETIENLSENTKLETLDLAKNRLKGIANLEKLELLEELWLNHNGVDDWKDIELLKVNKALQTI 289

  Fly   119 VLIGNPCVDYPHYRDYVVATLPQLNSLD 146
            .|..||......||..:...||||..:|
  Fly   290 YLEYNPLAKDVRYRSKLRDILPQLQKID 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tilBNP_608460.1 LRR_9 1..174 CDD:258718 51/158 (32%)
leucine-rich repeat 23..45 CDD:275378 5/21 (24%)
LRR_4 46..86 CDD:289563 20/39 (51%)
leucine-rich repeat 46..67 CDD:275378 12/20 (60%)
leucine-rich repeat 68..89 CDD:275378 8/20 (40%)
leucine-rich repeat 90..114 CDD:275378 9/29 (31%)
sds22NP_650619.1 leucine-rich repeat 43..62 CDD:275380
LRR_8 61..117 CDD:290566
leucine-rich repeat 63..84 CDD:275380
LRR_4 83..125 CDD:289563
leucine-rich repeat 85..106 CDD:275380
LRR_8 105..183 CDD:290566 7/21 (33%)
leucine-rich repeat 107..128 CDD:275380
LRR_4 128..168 CDD:289563 3/5 (60%)
leucine-rich repeat 129..150 CDD:275380
LRR_4 149..189 CDD:289563 10/27 (37%)
leucine-rich repeat 151..172 CDD:275380 5/9 (56%)
leucine-rich repeat 173..194 CDD:275380 5/21 (24%)
LRR_8 194..249 CDD:290566 25/54 (46%)
LRR_4 194..235 CDD:289563 20/40 (50%)
leucine-rich repeat 195..216 CDD:275380 12/20 (60%)
leucine-rich repeat 217..238 CDD:275380 8/20 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447143
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0531
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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