DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tilB and dtr

DIOPT Version :10

Sequence 1:NP_608460.1 Gene:tilB / 33130 FlyBaseID:FBgn0014395 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_724335.2 Gene:dtr / 318856 FlyBaseID:FBgn0023090 Length:1483 Species:Drosophila melanogaster


Alignment Length:342 Identity:85/342 - (24%)
Similarity:132/342 - (38%) Gaps:88/342 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EELVRK-KSEHNERLISTLEEISLHQEDIEVIEHIQNW---------CR------------DLKI 48
            :||.:| |.....||...|   .||.:..:.||.::.:         |.            .||.
  Fly    21 KELCKKDKLYQTPRLNDVL---YLHYQGFQCIESLEEYTELKCLWLECNAISEIQGLEKLSKLKC 82

  Fly    49 LLLQSNLIARLENLHKLKRLEYLNVAINNIERVEN---------------------------LEG 86
            |.||:|||.::|||...:.|:.||::.|:|.:::|                           |..
  Fly    83 LFLQNNLITKIENLDPCRELDTLNLSSNHIRKIQNIGTNVLPVLNTLTISSNYLKDSESLSDLIQ 147

  Fly    87 CESLSKLDLTLNFIRELTSVESLCGNYNLRELVLIGNPCVD-YPHYRDYVVATLPQLNSLDCVEI 150
            |::||.|||:.|.|.::..|:......||:.|||.|||.|. .|.||..::....:|..||...:
  Fly   148 CKTLSVLDLSNNRIDDILIVKIFEQMLNLKVLVLQGNPVVSRLPQYRKTLILACKELTYLDSRPV 212

  Fly   151 TPSERLRALRELSKNRSIIVQKQVEQDIERDEQR---------IRVAK------QQSALAEHCAG 200
            .|  |.||..|..|......:::......|.|:|         ||:..      ||..|......
  Fly   213 FP--RDRACAEAWKRDGYEGERKENNRWNRAERRKTRESINCTIRMRNSHRPPDQQDPLLRSSDS 275

  Fly   201 IED---EEERIKAFWQAKSEHC-PEIRTEIARQHRLGRERHETKSPL---DPLKPQRNLFAPC-- 256
            .:|   |..|.|.   |....| .::..|::.:..:..:...:.|.|   |....|.:|.|..  
  Fly   276 EDDTCAETARKKV---ALENGCVDDLWEEVSGEQPISEDGTNSSSSLEDNDGTSSQDDLIAEKLS 337

  Fly   257 ------GRPYNLNQAKL 267
                  |||..|.:.::
  Fly   338 NRRTLEGRPTVLYETEV 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tilBNP_608460.1 PPP1R42 <23..155 CDD:455733 49/180 (27%)
leucine-rich repeat 23..45 CDD:275378 6/42 (14%)
leucine-rich repeat 46..67 CDD:275378 11/20 (55%)
leucine-rich repeat 68..89 CDD:275378 8/47 (17%)
leucine-rich repeat 90..114 CDD:275378 8/23 (35%)
dtrNP_724335.2 leucine-rich repeat 38..57 CDD:275380 5/21 (24%)
PPP1R42 39..225 CDD:455733 53/190 (28%)
leucine-rich repeat 58..79 CDD:275380 1/20 (5%)
leucine-rich repeat 80..101 CDD:275380 11/20 (55%)
leucine-rich repeat 102..125 CDD:275380 6/22 (27%)
leucine-rich repeat 126..147 CDD:275380 1/20 (5%)
leucine-rich repeat 151..175 CDD:275380 8/23 (35%)

Return to query results.
Submit another query.